Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 36% ± 14% | |
microglial cell | 15 studies | 53% ± 23% | |
oligodendrocyte precursor cell | 11 studies | 42% ± 20% | |
macrophage | 10 studies | 33% ± 15% | |
dendritic cell | 6 studies | 20% ± 2% | |
myeloid cell | 6 studies | 31% ± 16% | |
GABAergic neuron | 5 studies | 36% ± 19% | |
fibroblast | 3 studies | 23% ± 6% | |
glutamatergic neuron | 3 studies | 62% ± 9% | |
astrocyte | 3 studies | 27% ± 14% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 34% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1290.87 | 2639 / 2642 | 100% | 10.91 | 703 / 705 |
thymus | 99% | 853.42 | 649 / 653 | 100% | 7.24 | 603 / 605 |
ovary | 97% | 561.52 | 174 / 180 | 85% | 2.05 | 365 / 430 |
lung | 84% | 263.97 | 485 / 578 | 80% | 2.38 | 928 / 1155 |
skin | 88% | 1043.19 | 1593 / 1809 | 76% | 3.40 | 359 / 472 |
breast | 75% | 204.20 | 342 / 459 | 88% | 2.89 | 982 / 1118 |
adrenal gland | 84% | 229.40 | 216 / 258 | 74% | 7.82 | 171 / 230 |
prostate | 96% | 411.24 | 236 / 245 | 61% | 1.19 | 306 / 502 |
uterus | 64% | 160.02 | 109 / 170 | 84% | 3.49 | 385 / 459 |
bladder | 76% | 276.57 | 16 / 21 | 64% | 2.15 | 322 / 504 |
pancreas | 49% | 102.75 | 160 / 328 | 91% | 3.11 | 162 / 178 |
kidney | 49% | 127.19 | 44 / 89 | 88% | 3.48 | 790 / 901 |
esophagus | 78% | 223.79 | 1127 / 1445 | 58% | 1.27 | 107 / 183 |
intestine | 80% | 223.89 | 775 / 966 | 52% | 1.42 | 273 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.06 | 1 / 1 |
blood vessel | 98% | 751.97 | 1310 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 3.81 | 42 / 45 |
stomach | 38% | 92.06 | 135 / 359 | 52% | 1.08 | 150 / 286 |
heart | 89% | 333.42 | 762 / 861 | 0% | 0 | 0 / 0 |
adipose | 88% | 308.69 | 1063 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 2.40 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 78% | 2.81 | 62 / 80 |
spleen | 58% | 161.46 | 140 / 241 | 0% | 0 | 0 / 0 |
muscle | 50% | 106.14 | 400 / 803 | 0% | 0 | 0 / 0 |
liver | 15% | 31.09 | 33 / 226 | 28% | 0.86 | 114 / 406 |
peripheral blood | 20% | 41.22 | 190 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0001525 | Biological process | angiogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0099175 | Biological process | regulation of postsynapse organization |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005829 | Cellular component | cytosol |
GO_0005925 | Cellular component | focal adhesion |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARHGAP22 |
Protein name | Rho GTPase activating protein 22 Rho GTPase-activating protein 22 (Rho-type GTPase-activating protein 22) ARHGAP22 |
Synonyms | RHOGAP2 hCG_2042896 |
Description | FUNCTION: Rho GTPase-activating protein involved in the signal transduction pathway that regulates endothelial cell capillary tube formation during angiogenesis. Acts as a GTPase activator for the RAC1 by converting it to an inactive GDP-bound state. Inhibits RAC1-dependent lamellipodia formation. May also play a role in transcription regulation via its interaction with VEZF1, by regulating activity of the endothelin-1 (EDN1) promoter (By similarity). . |
Accessions | D6RBJ8 ENST00000374170.5 Q7Z5H3 ENST00000249601.9 [Q7Z5H3-1] ENST00000477708.6 ENST00000417912.6 [Q7Z5H3-2] A6NJ38 ENST00000435790.6 [Q7Z5H3-5] D6R9V6 ENST00000460425.1 A6NHM7 ENST00000417247.6 [Q7Z5H3-3] A0A2X0SFC0 ENST00000374172.5 |