Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 29% ± 14% | |
endothelial cell | 14 studies | 30% ± 16% | |
oligodendrocyte precursor cell | 13 studies | 30% ± 14% | |
microglial cell | 12 studies | 52% ± 17% | |
GABAergic neuron | 10 studies | 40% ± 20% | |
macrophage | 8 studies | 34% ± 15% | |
fibroblast | 8 studies | 22% ± 7% | |
epithelial cell | 7 studies | 38% ± 21% | |
adipocyte | 7 studies | 22% ± 4% | |
neuron | 6 studies | 34% ± 15% | |
interneuron | 6 studies | 43% ± 23% | |
retinal cone cell | 5 studies | 33% ± 13% | |
goblet cell | 5 studies | 33% ± 26% | |
club cell | 5 studies | 27% ± 9% | |
type I pneumocyte | 5 studies | 26% ± 8% | |
type II pneumocyte | 5 studies | 29% ± 6% | |
oligodendrocyte | 5 studies | 35% ± 7% | |
retinal ganglion cell | 4 studies | 28% ± 7% | |
retina horizontal cell | 4 studies | 30% ± 15% | |
retinal pigment epithelial cell | 4 studies | 33% ± 10% | |
ciliated cell | 4 studies | 21% ± 4% | |
glutamatergic neuron | 4 studies | 53% ± 15% | |
smooth muscle cell | 4 studies | 18% ± 1% | |
basal cell | 4 studies | 40% ± 29% | |
ionocyte | 3 studies | 25% ± 5% | |
GABAergic interneuron | 3 studies | 29% ± 6% | |
granule cell | 3 studies | 21% ± 4% | |
amacrine cell | 3 studies | 29% ± 14% | |
GABAergic amacrine cell | 3 studies | 26% ± 9% | |
glycinergic amacrine cell | 3 studies | 20% ± 3% | |
retinal rod cell | 3 studies | 24% ± 7% | |
hepatocyte | 3 studies | 36% ± 22% | |
neural progenitor cell | 3 studies | 23% ± 7% | |
ependymal cell | 3 studies | 30% ± 14% | |
T cell | 3 studies | 18% ± 1% | |
capillary endothelial cell | 3 studies | 24% ± 4% | |
endothelial cell of lymphatic vessel | 3 studies | 24% ± 7% | |
pericyte | 3 studies | 19% ± 2% | |
respiratory goblet cell | 3 studies | 33% ± 10% | |
brush cell | 3 studies | 30% ± 11% | |
myeloid cell | 3 studies | 22% ± 4% | |
mucus secreting cell | 3 studies | 30% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2784.99 | 2640 / 2642 | 100% | 59.10 | 704 / 705 |
lung | 100% | 2772.39 | 578 / 578 | 100% | 28.83 | 1151 / 1155 |
esophagus | 100% | 2063.78 | 1445 / 1445 | 99% | 34.69 | 182 / 183 |
prostate | 100% | 2538.54 | 245 / 245 | 99% | 30.64 | 499 / 502 |
breast | 100% | 3142.84 | 459 / 459 | 99% | 33.57 | 1106 / 1118 |
pancreas | 100% | 2552.30 | 328 / 328 | 99% | 36.49 | 176 / 178 |
kidney | 100% | 2035.87 | 89 / 89 | 98% | 22.69 | 884 / 901 |
intestine | 100% | 2873.63 | 966 / 966 | 98% | 29.64 | 517 / 527 |
thymus | 100% | 3001.59 | 653 / 653 | 98% | 30.18 | 591 / 605 |
bladder | 100% | 2571.48 | 21 / 21 | 97% | 24.62 | 491 / 504 |
adrenal gland | 100% | 2722.88 | 258 / 258 | 97% | 25.09 | 223 / 230 |
stomach | 100% | 2998.15 | 359 / 359 | 97% | 32.78 | 277 / 286 |
ovary | 100% | 2702.61 | 180 / 180 | 94% | 13.64 | 405 / 430 |
liver | 100% | 1600.92 | 226 / 226 | 93% | 19.23 | 379 / 406 |
uterus | 100% | 2705.26 | 170 / 170 | 92% | 17.00 | 423 / 459 |
skin | 100% | 3202.81 | 1809 / 1809 | 90% | 22.62 | 427 / 472 |
spleen | 100% | 3968.69 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.28 | 1 / 1 |
adipose | 100% | 2734.17 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2037.51 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 1368.59 | 788 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1486.67 | 834 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 12.55 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 66% | 7.82 | 19 / 29 |
eye | 0% | 0 | 0 / 0 | 63% | 11.36 | 50 / 80 |
peripheral blood | 42% | 491.77 | 387 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0007015 | Biological process | actin filament organization |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_0051058 | Biological process | negative regulation of small GTPase mediated signal transduction |
GO_0002011 | Biological process | morphogenesis of an epithelial sheet |
GO_0006911 | Biological process | phagocytosis, engulfment |
GO_0001891 | Cellular component | phagocytic cup |
GO_0005737 | Cellular component | cytoplasm |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARHGAP12 |
Protein name | Rho GTPase activating protein 12 Rho GTPase activating protein 12, isoform CRA_a (cDNA FLJ10971 fis, clone PLACE1000977, weakly similar to BETA-CHIMAERIN) Rho GTPase-activating protein 12 (Rho-type GTPase-activating protein 12) ARHGAP12 protein (Rho GTPase activating protein 12) ARHGAP12 |
Synonyms | hCG_2017264 |
Description | FUNCTION: GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. . |
Accessions | ENST00000344936.7 [Q8IWW6-1] Q8IWW6 A0A2X0TVR3 H0Y5D8 Q9NV28 ENST00000396144.8 [Q8IWW6-4] Q1RLN5 ENST00000454919.1 ENST00000375245.8 ENST00000311380.8 [Q8IWW6-3] ENST00000375250.9 [Q8IWW6-2] |