ANTKMT report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
CD8-positive, alpha-beta T cell	12 studies	22% ± 6%	Explore
natural killer cell	10 studies	22% ± 6%	Explore
gamma-delta T cell	7 studies	24% ± 5%	Explore
plasma cell	6 studies	31% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	6 studies	23% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	25% ± 8%	Explore
epithelial cell	6 studies	36% ± 14%	Explore
regulatory T cell	6 studies	17% ± 2%	Explore
B cell	5 studies	20% ± 4%	Explore
classical monocyte	5 studies	26% ± 13%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	23% ± 8%	Explore
mucosal invariant T cell	5 studies	17% ± 1%	Explore
neuron	5 studies	25% ± 14%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	21% ± 4%	Explore
non-classical monocyte	4 studies	29% ± 12%	Explore
enterocyte	4 studies	18% ± 1%	Explore
plasmablast	3 studies	36% ± 19%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	27% ± 13%	Explore
hematopoietic precursor cell	3 studies	22% ± 1%	Explore
mature NK T cell	3 studies	24% ± 6%	Explore
retinal bipolar neuron	3 studies	27% ± 5%	Explore
myeloid cell	3 studies	24% ± 10%	Explore
astrocyte	3 studies	26% ± 10%	Explore
ciliated cell	3 studies	24% ± 2%	Explore
macrophage	3 studies	27% ± 7%	Explore
glutamatergic neuron	3 studies	39% ± 20%	Explore
dendritic cell	3 studies	37% ± 11%	Explore
plasmacytoid dendritic cell	3 studies	26% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	4 studies	23% ± 5%	Explore
lung	4 studies	21% ± 6%	Explore
eye	3 studies	22% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	892.20	258 / 258	100%	32.27	230 / 230
ovary	100%	380.56	180 / 180	100%	27.35	430 / 430
brain	100%	1073.36	2639 / 2642	100%	33.37	704 / 705
liver	100%	731.85	226 / 226	99%	19.33	403 / 406
esophagus	100%	582.66	1442 / 1445	99%	14.18	182 / 183
thymus	100%	835.98	653 / 653	99%	25.32	598 / 605
prostate	100%	760.88	244 / 245	99%	21.46	498 / 502
stomach	100%	630.50	359 / 359	99%	26.26	282 / 286
uterus	100%	592.95	170 / 170	98%	19.62	449 / 459
intestine	100%	780.71	966 / 966	98%	29.45	515 / 527
skin	99%	463.74	1788 / 1809	98%	22.93	462 / 472
bladder	100%	665.24	21 / 21	97%	22.41	487 / 504
breast	100%	574.29	459 / 459	95%	25.48	1061 / 1118
kidney	100%	1062.27	89 / 89	94%	18.98	851 / 901
lung	98%	592.21	569 / 578	96%	16.14	1104 / 1155
pancreas	99%	493.84	326 / 328	93%	20.21	166 / 178
eye	0%	0	0 / 0	100%	31.81	80 / 80
lymph node	0%	0	0 / 0	100%	37.33	29 / 29
spleen	100%	1046.94	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	39.22	1 / 1
blood vessel	99%	586.66	1324 / 1335	0%	0	0 / 0
adipose	99%	537.12	1193 / 1204	0%	0	0 / 0
heart	98%	585.63	847 / 861	0%	0	0 / 0
muscle	98%	475.93	784 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	19.92	43 / 45
peripheral blood	87%	397.67	809 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0