Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 46% ± 20% | |
microglial cell | 14 studies | 54% ± 15% | |
macrophage | 13 studies | 45% ± 23% | |
astrocyte | 12 studies | 30% ± 14% | |
endothelial cell of lymphatic vessel | 10 studies | 44% ± 20% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 14% | |
oligodendrocyte | 10 studies | 29% ± 10% | |
GABAergic neuron | 9 studies | 47% ± 24% | |
fibroblast | 9 studies | 31% ± 20% | |
ciliated cell | 9 studies | 32% ± 16% | |
glutamatergic neuron | 8 studies | 46% ± 26% | |
epithelial cell | 8 studies | 33% ± 16% | |
adipocyte | 8 studies | 29% ± 6% | |
smooth muscle cell | 7 studies | 23% ± 6% | |
pericyte | 7 studies | 31% ± 12% | |
myeloid cell | 7 studies | 40% ± 19% | |
type I pneumocyte | 7 studies | 38% ± 12% | |
neuron | 6 studies | 39% ± 20% | |
interneuron | 6 studies | 53% ± 21% | |
amacrine cell | 5 studies | 34% ± 13% | |
cardiac muscle cell | 5 studies | 37% ± 11% | |
retinal cone cell | 5 studies | 44% ± 18% | |
monocyte | 5 studies | 38% ± 12% | |
type II pneumocyte | 5 studies | 22% ± 6% | |
granule cell | 4 studies | 22% ± 6% | |
dendritic cell | 4 studies | 35% ± 4% | |
Mueller cell | 4 studies | 37% ± 16% | |
retinal rod cell | 4 studies | 50% ± 12% | |
endothelial cell of vascular tree | 4 studies | 32% ± 16% | |
club cell | 4 studies | 25% ± 7% | |
hepatic stellate cell | 3 studies | 49% ± 10% | |
glomerular endothelial cell | 3 studies | 31% ± 5% | |
GABAergic interneuron | 3 studies | 41% ± 7% | |
GABAergic amacrine cell | 3 studies | 31% ± 10% | |
glycinergic amacrine cell | 3 studies | 22% ± 1% | |
ependymal cell | 3 studies | 47% ± 9% | |
alveolar macrophage | 3 studies | 50% ± 9% | |
capillary endothelial cell | 3 studies | 36% ± 12% | |
basal cell | 3 studies | 34% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 9295.61 | 1445 / 1445 | 100% | 30.59 | 183 / 183 |
bladder | 100% | 8553.76 | 21 / 21 | 100% | 30.39 | 503 / 504 |
prostate | 100% | 3922.15 | 245 / 245 | 100% | 18.97 | 500 / 502 |
ovary | 100% | 5424.36 | 180 / 180 | 100% | 24.64 | 428 / 430 |
skin | 100% | 3802.15 | 1804 / 1809 | 100% | 99.21 | 471 / 472 |
breast | 100% | 5085.93 | 459 / 459 | 99% | 23.07 | 1112 / 1118 |
intestine | 100% | 6997.91 | 966 / 966 | 99% | 23.22 | 524 / 527 |
lung | 100% | 6287.48 | 577 / 578 | 100% | 22.46 | 1150 / 1155 |
stomach | 100% | 4040.00 | 358 / 359 | 100% | 24.05 | 285 / 286 |
uterus | 100% | 3805.61 | 170 / 170 | 99% | 23.17 | 454 / 459 |
brain | 99% | 3484.87 | 2606 / 2642 | 100% | 23.43 | 703 / 705 |
thymus | 100% | 4797.51 | 653 / 653 | 98% | 18.32 | 595 / 605 |
kidney | 100% | 3688.60 | 89 / 89 | 97% | 20.39 | 876 / 901 |
adrenal gland | 100% | 5933.90 | 258 / 258 | 89% | 11.08 | 205 / 230 |
pancreas | 90% | 1446.07 | 294 / 328 | 99% | 20.69 | 177 / 178 |
liver | 96% | 1756.48 | 218 / 226 | 73% | 6.87 | 295 / 406 |
adipose | 100% | 4655.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 7305.78 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 63.07 | 1 / 1 |
blood vessel | 100% | 4514.80 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 29.45 | 79 / 80 |
heart | 99% | 3243.24 | 849 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 21.42 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 9.39 | 28 / 29 |
muscle | 96% | 1885.43 | 768 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 73% | 1703.44 | 677 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048013 | Biological process | ephrin receptor signaling pathway |
GO_0006929 | Biological process | substrate-dependent cell migration |
GO_0016322 | Biological process | neuron remodeling |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0043005 | Cellular component | neuron projection |
GO_0005515 | Molecular function | protein binding |
GO_0046875 | Molecular function | ephrin receptor binding |
Gene name | ANKS1A |
Protein name | Ankyrin repeat and sterile alpha motif domain containing 1A ANKS1A protein Ankyrin repeat and SAM domain-containing protein 1A (Odin) |
Synonyms | KIAA0229 ODIN ANKS1 |
Description | FUNCTION: Regulator of different signaling pathways. Regulates EPHA8 receptor tyrosine kinase signaling to control cell migration and neurite retraction (By similarity). . |
Accessions | A0A3B3ISP1 ENST00000698906.1 ENST00000698908.1 Q49AR9 ENST00000360359.5 [Q92625-1] A0A3B3ITU5 ENST00000649117.1 A0A8V8TP68 Q05CP0 ENST00000698907.1 ENST00000650178.1 Q92625 A0A8V8TME4 A0A8V8TMV9 |