Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 33% ± 14% | |
macrophage | 10 studies | 31% ± 11% | |
astrocyte | 10 studies | 29% ± 15% | |
oligodendrocyte | 9 studies | 28% ± 10% | |
microglial cell | 8 studies | 28% ± 9% | |
oligodendrocyte precursor cell | 8 studies | 25% ± 11% | |
adipocyte | 7 studies | 23% ± 5% | |
GABAergic neuron | 7 studies | 38% ± 21% | |
glutamatergic neuron | 6 studies | 45% ± 25% | |
myeloid cell | 6 studies | 26% ± 9% | |
epithelial cell | 6 studies | 33% ± 17% | |
fibroblast | 6 studies | 24% ± 9% | |
smooth muscle cell | 6 studies | 20% ± 3% | |
interneuron | 5 studies | 41% ± 22% | |
dendritic cell | 5 studies | 21% ± 7% | |
T cell | 5 studies | 21% ± 6% | |
endothelial cell of lymphatic vessel | 5 studies | 23% ± 6% | |
enterocyte | 4 studies | 19% ± 5% | |
cardiac muscle cell | 4 studies | 17% ± 1% | |
lymphocyte | 4 studies | 28% ± 10% | |
monocyte | 4 studies | 25% ± 7% | |
pericyte | 4 studies | 23% ± 6% | |
non-classical monocyte | 3 studies | 22% ± 9% | |
GABAergic interneuron | 3 studies | 22% ± 9% | |
granule cell | 3 studies | 23% ± 0% | |
neuron | 3 studies | 33% ± 11% | |
plasma cell | 3 studies | 25% ± 5% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
ciliated cell | 3 studies | 23% ± 4% | |
retinal cone cell | 3 studies | 26% ± 8% | |
retinal rod cell | 3 studies | 27% ± 5% | |
CD8-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
hepatocyte | 3 studies | 30% ± 18% | |
retinal pigment epithelial cell | 3 studies | 39% ± 14% | |
natural killer cell | 3 studies | 20% ± 1% | |
goblet cell | 3 studies | 35% ± 23% | |
alveolar macrophage | 3 studies | 31% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 6523.40 | 245 / 245 | 100% | 13.24 | 502 / 502 |
esophagus | 100% | 8078.28 | 1445 / 1445 | 99% | 21.89 | 182 / 183 |
skin | 100% | 6327.42 | 1809 / 1809 | 99% | 15.23 | 469 / 472 |
thymus | 100% | 7141.00 | 653 / 653 | 99% | 13.76 | 601 / 605 |
stomach | 100% | 5706.76 | 359 / 359 | 99% | 15.60 | 284 / 286 |
breast | 100% | 6238.41 | 459 / 459 | 99% | 14.81 | 1109 / 1118 |
intestine | 100% | 10858.90 | 966 / 966 | 99% | 14.15 | 522 / 527 |
pancreas | 100% | 4847.83 | 328 / 328 | 98% | 11.79 | 175 / 178 |
bladder | 100% | 6505.43 | 21 / 21 | 98% | 10.38 | 495 / 504 |
uterus | 100% | 6249.33 | 170 / 170 | 98% | 9.88 | 450 / 459 |
kidney | 100% | 3992.98 | 89 / 89 | 98% | 12.26 | 879 / 901 |
lung | 100% | 6737.95 | 578 / 578 | 97% | 11.74 | 1125 / 1155 |
brain | 98% | 3616.10 | 2578 / 2642 | 99% | 17.89 | 700 / 705 |
adrenal gland | 100% | 6012.01 | 258 / 258 | 95% | 9.84 | 219 / 230 |
ovary | 100% | 5944.41 | 180 / 180 | 92% | 7.44 | 395 / 430 |
liver | 100% | 2771.46 | 226 / 226 | 72% | 4.61 | 294 / 406 |
adipose | 100% | 5750.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6334.43 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 7586.81 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 8357.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.95 | 45 / 45 |
eye | 0% | 0 | 0 / 0 | 99% | 14.03 | 79 / 80 |
heart | 98% | 3922.23 | 843 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 13.23 | 28 / 29 |
peripheral blood | 96% | 4249.66 | 891 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006325 | Biological process | chromatin organization |
GO_0035064 | Molecular function | methylated histone binding |
GO_0070577 | Molecular function | lysine-acetylated histone binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0140566 | Molecular function | histone reader activity |
Gene name | ZZEF1 |
Protein name | Zinc finger ZZ-type and EF-hand domain containing 1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 Alternative protein ZZEF1 |
Synonyms | KIAA0399 |
Description | FUNCTION: Histone H3 reader which may act as a transcriptional coactivator for KLF6 and KLF9 transcription factors. . |
Accessions | ENST00000572699.1 I3L1Q8 L8EAS1 ENST00000572831.1 ENST00000381638.7 [O43149-1] I3L141 ENST00000573183.1 O43149 I3L3Q3 I3L2N1 ENST00000571436.5 |