ZNF540 | OmnibusX

Name	Number of supported studies	Average coverage
glutamatergic neuron	5 studies	48% ± 22%	Explore
GABAergic neuron	5 studies	44% ± 19%	Explore
oligodendrocyte precursor cell	4 studies	22% ± 6%	Explore
interneuron	4 studies	43% ± 24%	Explore
oligodendrocyte	4 studies	22% ± 6%	Explore
amacrine cell	3 studies	23% ± 1%	Explore
retina horizontal cell	3 studies	16% ± 1%	Explore
retinal cone cell	3 studies	19% ± 1%	Explore
retinal rod cell	3 studies	27% ± 8%	Explore
astrocyte	3 studies	23% ± 7%	Explore

Name	Number of supported studies	Average coverage
brain	5 studies	40% ± 19%	Explore
eye	4 studies	22% ± 5%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1545.45	2636 / 2642	99%	4.78	699 / 705
thymus	100%	1412.07	653 / 653	99%	6.85	596 / 605
prostate	100%	1011.33	245 / 245	96%	2.59	484 / 502
adrenal gland	98%	530.52	254 / 258	97%	10.32	222 / 230
kidney	100%	607.99	89 / 89	81%	2.24	728 / 901
breast	81%	332.24	370 / 459	76%	2.18	847 / 1118
pancreas	73%	203.47	241 / 328	75%	2.06	133 / 178
uterus	98%	830.80	167 / 170	36%	0.69	165 / 459
lung	91%	389.60	528 / 578	35%	0.78	399 / 1155
bladder	100%	616.38	21 / 21	20%	0.40	101 / 504
ovary	100%	1295.29	180 / 180	10%	0.21	44 / 430
stomach	93%	402.60	333 / 359	14%	0.24	40 / 286
intestine	94%	585.95	911 / 966	11%	0.24	58 / 527
esophagus	86%	511.71	1243 / 1445	14%	0.24	26 / 183
spleen	100%	720.35	241 / 241	0%	0	0 / 0
blood vessel	99%	780.78	1328 / 1335	0%	0	0 / 0
heart	95%	452.81	817 / 861	0%	0	0 / 0
skin	50%	149.65	901 / 1809	32%	0.61	150 / 472
liver	56%	144.50	126 / 226	17%	0.28	69 / 406
adipose	67%	203.00	804 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	48%	0.97	14 / 29
muscle	44%	112.62	352 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	36%	0.50	16 / 45
eye	0%	0	0 / 0	35%	0.66	28 / 80
peripheral blood	13%	32.51	119 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0045892	Biological process	negative regulation of DNA-templated transcription
GO_0017148	Biological process	negative regulation of translation
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0000900	Molecular function	mRNA regulatory element binding translation repressor activity
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_0005515	Molecular function	protein binding
GO_0046872	Molecular function	metal ion binding

Gene name	ZNF540
Protein name	Zinc finger protein 540
Synonyms	hCG_1821866 Nbla10512
Description	FUNCTION: May act as a transcriptional repressor. .
Accessions	ENST00000343599.5 [Q8NDQ6-1] ENST00000592533.5 [Q8NDQ6-1] Q8NDQ6 K7EK80 ENST00000589117.5 [Q8NDQ6-2] ENST00000586134.5 K7EQ46 ENST00000586792.5 K7ER55 ENST00000590588.5 ENST00000316433.9 [Q8NDQ6-1]

ZNF540 report