Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 18% ± 2% | |
endothelial cell | 3 studies | 17% ± 1% | |
GABAergic neuron | 3 studies | 32% ± 7% | |
astrocyte | 3 studies | 17% ± 2% | |
glutamatergic neuron | 3 studies | 41% ± 11% | |
oligodendrocyte precursor cell | 3 studies | 19% ± 2% | |
oligodendrocyte | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 29% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 985.50 | 258 / 258 | 100% | 5.05 | 230 / 230 |
thymus | 100% | 1423.15 | 653 / 653 | 100% | 5.90 | 604 / 605 |
prostate | 100% | 1278.91 | 245 / 245 | 100% | 4.32 | 501 / 502 |
brain | 100% | 886.52 | 2633 / 2642 | 100% | 4.81 | 705 / 705 |
breast | 100% | 1069.18 | 459 / 459 | 100% | 4.95 | 1114 / 1118 |
uterus | 100% | 1182.99 | 170 / 170 | 100% | 4.63 | 457 / 459 |
lung | 100% | 1073.51 | 578 / 578 | 99% | 4.23 | 1144 / 1155 |
bladder | 100% | 914.67 | 21 / 21 | 99% | 4.72 | 499 / 504 |
esophagus | 100% | 741.81 | 1442 / 1445 | 99% | 4.11 | 181 / 183 |
kidney | 100% | 879.31 | 89 / 89 | 98% | 4.79 | 886 / 901 |
pancreas | 100% | 534.31 | 327 / 328 | 98% | 5.32 | 175 / 178 |
stomach | 100% | 705.14 | 359 / 359 | 98% | 3.64 | 279 / 286 |
intestine | 100% | 1055.35 | 966 / 966 | 96% | 3.75 | 506 / 527 |
ovary | 100% | 1252.33 | 180 / 180 | 92% | 2.53 | 396 / 430 |
skin | 100% | 829.96 | 1809 / 1809 | 92% | 3.58 | 433 / 472 |
liver | 100% | 538.08 | 225 / 226 | 91% | 2.60 | 368 / 406 |
adipose | 100% | 940.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.15 | 29 / 29 |
spleen | 100% | 1911.22 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.79 | 1 / 1 |
blood vessel | 100% | 775.84 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 490.83 | 855 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 3.32 | 43 / 45 |
muscle | 88% | 260.52 | 704 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 436.89 | 691 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 64% | 2.14 | 51 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031965 | Cellular component | nuclear membrane |
GO_0017053 | Cellular component | transcription repressor complex |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF224 |
Protein name | ZNF224 [amino acids 1-78] ZNF224 protein Zinc finger protein 224 (Bone marrow zinc finger 2) (BMZF-2) (Zinc finger protein 233) (Zinc finger protein 255) (Zinc finger protein 27) (Zinc finger protein KOX22) Zinc finger protein 224 |
Synonyms | ZNF233 ZNF255 KOX22 BMZF2 ZNF27 |
Description | FUNCTION: May be involved in transcriptional regulation as a transcriptional repressor. The DEPDC1A-ZNF224 complex may play a critical role in bladder carcinogenesis by repressing the transcription of the A20 gene, leading to transport of NF-KB protein into the nucleus, resulting in suppression of apoptosis of bladder cancer cells. . |
Accessions | K7EL24 K7ENI7 ENST00000591511.1 Q9HCA8 Q9NZL3 ENST00000336976.10 ENST00000589870.5 Q9BU51 ENST00000684943.1 ENST00000693561.1 |