Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 24% ± 7% | |
microglial cell | 7 studies | 22% ± 6% | |
astrocyte | 7 studies | 26% ± 10% | |
oligodendrocyte | 7 studies | 23% ± 7% | |
macrophage | 6 studies | 25% ± 5% | |
epithelial cell | 5 studies | 31% ± 9% | |
fibroblast | 5 studies | 19% ± 5% | |
GABAergic neuron | 5 studies | 34% ± 15% | |
myeloid cell | 4 studies | 18% ± 2% | |
natural killer cell | 4 studies | 16% ± 1% | |
abnormal cell | 4 studies | 26% ± 5% | |
glutamatergic neuron | 4 studies | 45% ± 19% | |
oligodendrocyte precursor cell | 4 studies | 32% ± 9% | |
classical monocyte | 3 studies | 24% ± 4% | |
hematopoietic precursor cell | 3 studies | 20% ± 4% | |
ciliated cell | 3 studies | 22% ± 1% | |
lymphocyte | 3 studies | 18% ± 2% | |
adipocyte | 3 studies | 22% ± 3% | |
endothelial cell of lymphatic vessel | 3 studies | 19% ± 3% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
goblet cell | 3 studies | 27% ± 10% | |
transit amplifying cell | 3 studies | 26% ± 10% | |
neuron | 3 studies | 26% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3571.89 | 1445 / 1445 | 100% | 36.91 | 183 / 183 |
intestine | 100% | 3686.17 | 966 / 966 | 100% | 22.33 | 527 / 527 |
ovary | 100% | 3853.63 | 180 / 180 | 100% | 34.43 | 430 / 430 |
prostate | 100% | 3860.63 | 245 / 245 | 100% | 25.46 | 502 / 502 |
skin | 100% | 3464.69 | 1809 / 1809 | 100% | 32.69 | 472 / 472 |
lung | 100% | 4072.07 | 578 / 578 | 100% | 30.80 | 1154 / 1155 |
breast | 100% | 3574.13 | 459 / 459 | 100% | 44.43 | 1115 / 1118 |
stomach | 100% | 2595.67 | 359 / 359 | 100% | 25.31 | 285 / 286 |
uterus | 100% | 3726.27 | 170 / 170 | 100% | 28.79 | 457 / 459 |
pancreas | 100% | 1562.45 | 328 / 328 | 99% | 24.26 | 177 / 178 |
brain | 99% | 2504.55 | 2623 / 2642 | 100% | 32.97 | 705 / 705 |
bladder | 100% | 3514.62 | 21 / 21 | 99% | 23.17 | 500 / 504 |
thymus | 100% | 3562.14 | 653 / 653 | 99% | 23.36 | 599 / 605 |
kidney | 100% | 2622.33 | 89 / 89 | 96% | 17.43 | 864 / 901 |
liver | 100% | 1641.61 | 226 / 226 | 94% | 18.06 | 380 / 406 |
adrenal gland | 100% | 2686.83 | 258 / 258 | 93% | 18.27 | 215 / 230 |
adipose | 100% | 3311.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3656.33 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.61 | 29 / 29 |
muscle | 100% | 4865.18 | 803 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 4759.71 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 3820.77 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.97 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.68 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 21.34 | 79 / 80 |
heart | 98% | 2357.78 | 842 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008283 | Biological process | cell population proliferation |
GO_0030154 | Biological process | cell differentiation |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031011 | Cellular component | Ino80 complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003712 | Molecular function | transcription coregulator activity |
Gene name | YY1AP1 |
Protein name | YY1 associated protein 1 YY1AP1 protein YY1 associated protein 1 (cDNA FLJ59159, highly similar to YY1-associated protein 1) YY1-associated protein 1 (Hepatocellular carcinoma susceptibility protein) (Hepatocellular carcinoma-associated protein 2) |
Synonyms | HCCA2 DKFZp686J14104 YY1AP |
Description | FUNCTION: Associates with the INO80 chromatin remodeling complex, which is responsible for transcriptional regulation, DNA repair, and replication . Enhances transcription activation by YY1 . Plays a role in cell cycle regulation . . |
Accessions | ENST00000361140.8 B4DZQ4 ENST00000368339.9 [Q9H869-9] ENST00000404643.5 [Q9H869-4] ENST00000354691.9 ENST00000359205.9 [Q9H869-3] B0QZ55 ENST00000407221.5 [Q9H869-6] ENST00000454523.5 ENST00000355499.9 [Q9H869-2] Q9H869 A3KFK1 F8WD62 ENST00000443231.5 ENST00000361831.9 [Q9H869-3] ENST00000311573.9 [Q9H869-6] ENST00000295566.8 [Q9H869-1] ENST00000368330.6 [Q9H869-2] ENST00000368340.9 [Q9H869-8] A3KFK2 I6L9C2 ENST00000405763.7 ENST00000436865.5 ENST00000347088.9 [Q9H869-2] Q68CT8 |