Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 23 studies | 25% ± 8% | |
oligodendrocyte | 15 studies | 44% ± 18% | |
non-classical monocyte | 12 studies | 28% ± 16% | |
retinal rod cell | 9 studies | 51% ± 16% | |
microglial cell | 9 studies | 24% ± 10% | |
classical monocyte | 7 studies | 23% ± 10% | |
retina horizontal cell | 7 studies | 63% ± 19% | |
pericyte | 7 studies | 21% ± 4% | |
smooth muscle cell | 7 studies | 22% ± 3% | |
endothelial cell of vascular tree | 7 studies | 22% ± 4% | |
macrophage | 7 studies | 27% ± 9% | |
retinal cone cell | 6 studies | 28% ± 9% | |
glutamatergic neuron | 6 studies | 37% ± 22% | |
fibroblast | 5 studies | 21% ± 4% | |
GABAergic neuron | 5 studies | 35% ± 15% | |
endothelial cell of lymphatic vessel | 4 studies | 23% ± 4% | |
epithelial cell | 4 studies | 39% ± 13% | |
cardiac muscle cell | 4 studies | 25% ± 2% | |
regulatory T cell | 4 studies | 19% ± 2% | |
vein endothelial cell | 4 studies | 30% ± 11% | |
adipocyte | 4 studies | 27% ± 5% | |
goblet cell | 4 studies | 31% ± 20% | |
monocyte | 3 studies | 23% ± 5% | |
squamous epithelial cell | 3 studies | 31% ± 20% | |
retinal bipolar neuron | 3 studies | 19% ± 2% | |
retinal ganglion cell | 3 studies | 25% ± 8% | |
myeloid cell | 3 studies | 17% ± 0% | |
amacrine cell | 3 studies | 28% ± 6% | |
ciliated cell | 3 studies | 28% ± 1% | |
myofibroblast cell | 3 studies | 20% ± 1% | |
basal cell | 3 studies | 22% ± 5% | |
brush cell | 3 studies | 25% ± 8% | |
astrocyte | 3 studies | 25% ± 3% | |
interneuron | 3 studies | 38% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1899.64 | 244 / 245 | 99% | 13.10 | 496 / 502 |
kidney | 100% | 2766.03 | 89 / 89 | 98% | 22.37 | 886 / 901 |
breast | 100% | 3103.66 | 459 / 459 | 97% | 16.28 | 1087 / 1118 |
thymus | 100% | 2844.23 | 653 / 653 | 97% | 15.26 | 588 / 605 |
brain | 99% | 2671.03 | 2619 / 2642 | 98% | 9.01 | 691 / 705 |
intestine | 100% | 2579.95 | 966 / 966 | 97% | 8.41 | 510 / 527 |
pancreas | 98% | 1375.16 | 320 / 328 | 99% | 13.44 | 176 / 178 |
stomach | 100% | 1916.60 | 358 / 359 | 96% | 9.00 | 275 / 286 |
lung | 100% | 3043.23 | 576 / 578 | 95% | 8.56 | 1103 / 1155 |
esophagus | 100% | 2183.79 | 1438 / 1445 | 91% | 8.55 | 167 / 183 |
bladder | 100% | 2548.76 | 21 / 21 | 90% | 7.50 | 456 / 504 |
ovary | 97% | 1551.98 | 175 / 180 | 92% | 8.59 | 397 / 430 |
liver | 100% | 2431.28 | 226 / 226 | 87% | 9.06 | 355 / 406 |
skin | 99% | 2460.27 | 1791 / 1809 | 83% | 7.83 | 390 / 472 |
adrenal gland | 98% | 1762.12 | 253 / 258 | 81% | 7.44 | 187 / 230 |
uterus | 100% | 2553.23 | 170 / 170 | 79% | 6.35 | 363 / 459 |
adipose | 100% | 3981.92 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5125.52 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2208.20 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 2975.01 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 2084.70 | 838 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 80% | 4.97 | 36 / 45 |
lymph node | 0% | 0 | 0 / 0 | 79% | 5.56 | 23 / 29 |
peripheral blood | 73% | 841.60 | 679 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 63% | 4.11 | 50 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005730 | Cellular component | nucleolus |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | YPEL2 |
Protein name | Protein yippee-like 2 Protein yippee-like |
Synonyms | YPEL FKSG4 |
Description | |
Accessions | ENST00000585166.1 Q96QA6 ENST00000672916.2 A0A5F9ZH55 ENST00000312655.9 |