Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 35 studies | 43% ± 21% | |
CD16-negative, CD56-bright natural killer cell, human | 15 studies | 65% ± 16% | |
CD8-positive, alpha-beta T cell | 14 studies | 22% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 13 studies | 32% ± 19% | |
mature NK T cell | 13 studies | 38% ± 17% | |
gamma-delta T cell | 13 studies | 32% ± 14% | |
innate lymphoid cell | 6 studies | 56% ± 16% | |
T cell | 5 studies | 20% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 5 studies | 23% ± 4% | |
effector CD8-positive, alpha-beta T cell | 3 studies | 23% ± 6% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 25% ± 11% | |
group 3 innate lymphoid cell | 3 studies | 40% ± 17% |
Insufficient scRNA-seq data for expression of XCL2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 95% | 51.92 | 551 / 578 | 86% | 4.05 | 996 / 1155 |
liver | 93% | 29.99 | 210 / 226 | 62% | 2.95 | 252 / 406 |
uterus | 68% | 9.77 | 115 / 170 | 75% | 4.70 | 346 / 459 |
kidney | 54% | 8.00 | 48 / 89 | 73% | 4.07 | 662 / 901 |
thymus | 63% | 12.84 | 413 / 653 | 64% | 3.73 | 388 / 605 |
stomach | 69% | 11.81 | 246 / 359 | 57% | 2.39 | 163 / 286 |
breast | 56% | 8.83 | 259 / 459 | 68% | 3.31 | 756 / 1118 |
prostate | 61% | 8.28 | 150 / 245 | 54% | 1.33 | 272 / 502 |
bladder | 52% | 13.86 | 11 / 21 | 62% | 2.00 | 310 / 504 |
ovary | 28% | 3.02 | 51 / 180 | 80% | 4.46 | 344 / 430 |
esophagus | 38% | 4.17 | 547 / 1445 | 64% | 1.62 | 117 / 183 |
intestine | 57% | 14.20 | 549 / 966 | 44% | 1.43 | 232 / 527 |
spleen | 100% | 250.57 | 241 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 22.55 | 28 / 29 |
peripheral blood | 89% | 234.84 | 831 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 5.08 | 40 / 45 |
pancreas | 21% | 1.84 | 68 / 328 | 65% | 2.14 | 115 / 178 |
skin | 16% | 1.43 | 298 / 1809 | 63% | 5.08 | 299 / 472 |
adipose | 65% | 13.74 | 779 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 24% | 1.99 | 61 / 258 | 23% | 0.53 | 53 / 230 |
blood vessel | 45% | 8.07 | 597 / 1335 | 0% | 0 | 0 / 0 |
heart | 28% | 3.04 | 241 / 861 | 0% | 0 | 0 / 0 |
brain | 11% | 1.08 | 284 / 2642 | 13% | 0.29 | 91 / 705 |
eye | 0% | 0 | 0 / 0 | 16% | 1.01 | 13 / 80 |
muscle | 4% | 0.28 | 31 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0061844 | Biological process | antimicrobial humoral immune response mediated by antimicrobial peptide |
GO_0070098 | Biological process | chemokine-mediated signaling pathway |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0006954 | Biological process | inflammatory response |
GO_0043547 | Biological process | positive regulation of GTPase activity |
GO_0008015 | Biological process | blood circulation |
GO_0048245 | Biological process | eosinophil chemotaxis |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0048020 | Molecular function | CCR chemokine receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0008009 | Molecular function | chemokine activity |
Gene name | XCL2 |
Protein name | Cytokine SCM-1 beta (C motif chemokine 2) (XC chemokine ligand 2) |
Synonyms | SCYC2 |
Description | FUNCTION: Chemotactic activity for lymphocytes but not for monocytes or neutrophils. . |
Accessions | ENST00000367819.3 Q9UBD3 |