Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| plasma cell | 4 studies | 33% ± 12% | |
| fibroblast | 4 studies | 20% ± 3% | |
| Mueller cell | 4 studies | 46% ± 18% | |
| glutamatergic neuron | 4 studies | 25% ± 4% | |
| endothelial cell | 3 studies | 40% ± 27% | |
| GABAergic neuron | 3 studies | 25% ± 4% | |
| ciliated cell | 3 studies | 20% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 23% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 3352.12 | 245 / 245 | 100% | 39.07 | 501 / 502 |
| esophagus | 100% | 2485.71 | 1444 / 1445 | 66% | 8.24 | 120 / 183 |
| bladder | 100% | 1291.67 | 21 / 21 | 60% | 9.40 | 304 / 504 |
| uterus | 92% | 518.00 | 156 / 170 | 67% | 14.30 | 306 / 459 |
| intestine | 97% | 1487.80 | 936 / 966 | 53% | 4.53 | 278 / 527 |
| stomach | 90% | 514.23 | 323 / 359 | 58% | 4.37 | 166 / 286 |
| lung | 70% | 261.22 | 407 / 578 | 73% | 9.46 | 846 / 1155 |
| ovary | 99% | 735.44 | 178 / 180 | 36% | 3.44 | 155 / 430 |
| breast | 65% | 276.98 | 298 / 459 | 57% | 5.21 | 641 / 1118 |
| skin | 95% | 1941.74 | 1727 / 1809 | 21% | 1.74 | 101 / 472 |
| brain | 56% | 211.96 | 1470 / 2642 | 57% | 3.58 | 402 / 705 |
| thymus | 50% | 160.09 | 329 / 653 | 58% | 9.72 | 348 / 605 |
| ureter | 0% | 0 | 0 / 0 | 100% | 3.35 | 1 / 1 |
| spleen | 96% | 485.99 | 231 / 241 | 0% | 0 | 0 / 0 |
| liver | 38% | 143.43 | 87 / 226 | 42% | 4.07 | 169 / 406 |
| pancreas | 6% | 14.34 | 19 / 328 | 69% | 7.65 | 122 / 178 |
| tonsil | 0% | 0 | 0 / 0 | 71% | 10.64 | 32 / 45 |
| blood vessel | 59% | 239.80 | 786 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 59% | 7.62 | 17 / 29 |
| kidney | 25% | 73.33 | 22 / 89 | 28% | 3.13 | 249 / 901 |
| adipose | 50% | 171.58 | 599 / 1204 | 0% | 0 | 0 / 0 |
| heart | 45% | 142.24 | 387 / 861 | 0% | 0 | 0 / 0 |
| adrenal gland | 6% | 16.56 | 15 / 258 | 22% | 2.43 | 50 / 230 |
| peripheral blood | 21% | 144.54 | 192 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 6% | 0.37 | 5 / 80 |
| muscle | 2% | 6.14 | 19 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0071300 | Biological process | cellular response to retinoic acid |
| GO_1904105 | Biological process | positive regulation of convergent extension involved in gastrulation |
| GO_0042692 | Biological process | muscle cell differentiation |
| GO_0002062 | Biological process | chondrocyte differentiation |
| GO_0060070 | Biological process | canonical Wnt signaling pathway |
| GO_0070307 | Biological process | lens fiber cell development |
| GO_0030182 | Biological process | neuron differentiation |
| GO_0045165 | Biological process | cell fate commitment |
| GO_0030335 | Biological process | positive regulation of cell migration |
| GO_2000052 | Biological process | positive regulation of non-canonical Wnt signaling pathway |
| GO_0045444 | Biological process | fat cell differentiation |
| GO_0005615 | Cellular component | extracellular space |
| GO_0005576 | Cellular component | extracellular region |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0030666 | Cellular component | endocytic vesicle membrane |
| GO_0005796 | Cellular component | Golgi lumen |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0062023 | Cellular component | collagen-containing extracellular matrix |
| GO_0005788 | Cellular component | endoplasmic reticulum lumen |
| GO_0005109 | Molecular function | frizzled binding |
| GO_0005102 | Molecular function | signaling receptor binding |
| GO_0005125 | Molecular function | cytokine activity |
| Gene name | WNT5B |
| Protein name | Protein Wnt-5b Protein Wnt |
| Synonyms | |
| Description | FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters (By similarity). . FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. . FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. . FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. . FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. . |
| Accessions | F5H7Q6 ENST00000543071.5 ENST00000542408.1 ENST00000537031.5 Q9H1J7 F5H034 ENST00000397196.7 F5GYM2 ENST00000539198.5 ENST00000545811.5 F5H364 ENST00000310594.7 |
