Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 32% ± 11% | |
astrocyte | 16 studies | 36% ± 19% | |
oligodendrocyte | 14 studies | 45% ± 13% | |
microglial cell | 13 studies | 37% ± 13% | |
glutamatergic neuron | 12 studies | 58% ± 26% | |
oligodendrocyte precursor cell | 12 studies | 39% ± 14% | |
GABAergic neuron | 11 studies | 49% ± 26% | |
macrophage | 9 studies | 37% ± 13% | |
adipocyte | 9 studies | 27% ± 8% | |
fibroblast | 8 studies | 26% ± 8% | |
neuron | 6 studies | 42% ± 17% | |
interneuron | 6 studies | 55% ± 27% | |
retinal ganglion cell | 6 studies | 32% ± 21% | |
T cell | 5 studies | 22% ± 6% | |
myeloid cell | 5 studies | 28% ± 11% | |
endothelial cell of lymphatic vessel | 5 studies | 27% ± 7% | |
pericyte | 5 studies | 28% ± 9% | |
smooth muscle cell | 5 studies | 24% ± 6% | |
type I pneumocyte | 5 studies | 22% ± 5% | |
type II pneumocyte | 5 studies | 22% ± 5% | |
epithelial cell | 4 studies | 28% ± 15% | |
granule cell | 4 studies | 42% ± 15% | |
cardiac muscle cell | 4 studies | 33% ± 3% | |
dendritic cell | 4 studies | 23% ± 3% | |
mast cell | 4 studies | 24% ± 5% | |
amacrine cell | 4 studies | 37% ± 19% | |
retina horizontal cell | 4 studies | 37% ± 16% | |
retinal cone cell | 4 studies | 40% ± 15% | |
retinal rod cell | 4 studies | 40% ± 9% | |
club cell | 4 studies | 20% ± 6% | |
monocyte | 4 studies | 30% ± 7% | |
GABAergic interneuron | 3 studies | 48% ± 4% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
GABAergic amacrine cell | 3 studies | 35% ± 14% | |
Mueller cell | 3 studies | 26% ± 10% | |
glycinergic amacrine cell | 3 studies | 34% ± 8% | |
hepatocyte | 3 studies | 41% ± 15% | |
alveolar macrophage | 3 studies | 39% ± 7% | |
ciliated cell | 3 studies | 27% ± 7% | |
natural killer cell | 3 studies | 25% ± 4% | |
lymphocyte | 3 studies | 29% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3031.18 | 2641 / 2642 | 100% | 16.99 | 705 / 705 |
breast | 100% | 1474.08 | 459 / 459 | 100% | 11.36 | 1116 / 1118 |
prostate | 100% | 1392.34 | 245 / 245 | 100% | 11.28 | 501 / 502 |
thymus | 100% | 1722.58 | 653 / 653 | 100% | 11.06 | 602 / 605 |
lung | 100% | 1236.86 | 576 / 578 | 99% | 7.52 | 1141 / 1155 |
adrenal gland | 100% | 1667.33 | 258 / 258 | 98% | 15.00 | 226 / 230 |
esophagus | 100% | 1120.89 | 1443 / 1445 | 98% | 8.60 | 180 / 183 |
uterus | 100% | 1420.69 | 170 / 170 | 98% | 6.50 | 449 / 459 |
skin | 100% | 1206.51 | 1802 / 1809 | 97% | 9.27 | 460 / 472 |
kidney | 99% | 809.36 | 88 / 89 | 98% | 8.24 | 881 / 901 |
stomach | 100% | 949.27 | 359 / 359 | 97% | 6.27 | 276 / 286 |
pancreas | 97% | 553.14 | 319 / 328 | 98% | 6.81 | 174 / 178 |
bladder | 100% | 1380.57 | 21 / 21 | 95% | 6.03 | 477 / 504 |
intestine | 100% | 1320.23 | 966 / 966 | 92% | 4.98 | 484 / 527 |
liver | 100% | 812.06 | 226 / 226 | 89% | 4.00 | 360 / 406 |
ovary | 100% | 1096.18 | 180 / 180 | 84% | 3.94 | 363 / 430 |
adipose | 100% | 1573.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1689.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.48 | 29 / 29 |
spleen | 100% | 1116.67 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 1296.76 | 801 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 8.34 | 44 / 45 |
heart | 95% | 1012.34 | 820 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 4.34 | 65 / 80 |
peripheral blood | 72% | 641.14 | 671 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002244 | Biological process | hematopoietic progenitor cell differentiation |
GO_0005737 | Cellular component | cytoplasm |
Gene name | WDR7 |
Protein name | WDR7 protein WD repeat-containing protein 7 (Rabconnectin-3 beta) (TGF-beta resistance-associated protein TRAG) WD repeat domain 7 |
Synonyms | KIAA0541 TRAG |
Description | |
Accessions | ENST00000591449.1 K7EMF3 K7EPQ4 K7EMB8 ENST00000593058.1 ENST00000357574.7 [Q9Y4E6-2] K7EPY9 A2RRE0 ENST00000254442.8 [Q9Y4E6-1] ENST00000585669.1 Q9Y4E6 ENST00000589935.1 |