Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 11 studies | 34% ± 19% | |
astrocyte | 11 studies | 32% ± 15% | |
non-classical monocyte | 9 studies | 25% ± 12% | |
oligodendrocyte | 8 studies | 28% ± 9% | |
macrophage | 7 studies | 31% ± 8% | |
GABAergic neuron | 6 studies | 37% ± 16% | |
B cell | 6 studies | 22% ± 4% | |
microglial cell | 6 studies | 25% ± 7% | |
epithelial cell | 5 studies | 35% ± 13% | |
fibroblast | 5 studies | 21% ± 6% | |
neuron | 4 studies | 30% ± 9% | |
myeloid cell | 4 studies | 29% ± 15% | |
adipocyte | 4 studies | 23% ± 5% | |
dendritic cell | 4 studies | 25% ± 12% | |
ciliated cell | 4 studies | 28% ± 7% | |
glutamatergic neuron | 4 studies | 55% ± 20% | |
endothelial cell of lymphatic vessel | 4 studies | 25% ± 3% | |
interneuron | 4 studies | 37% ± 22% | |
classical monocyte | 3 studies | 25% ± 6% | |
retinal cone cell | 3 studies | 28% ± 4% | |
monocyte | 3 studies | 23% ± 6% | |
pericyte | 3 studies | 20% ± 5% | |
type I pneumocyte | 3 studies | 22% ± 6% | |
goblet cell | 3 studies | 27% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4608.90 | 1445 / 1445 | 100% | 18.01 | 183 / 183 |
lung | 100% | 4840.46 | 578 / 578 | 100% | 18.60 | 1155 / 1155 |
intestine | 100% | 5053.41 | 966 / 966 | 100% | 15.93 | 526 / 527 |
ovary | 100% | 5448.69 | 180 / 180 | 100% | 13.11 | 429 / 430 |
stomach | 100% | 4150.79 | 359 / 359 | 100% | 16.43 | 285 / 286 |
breast | 100% | 5245.00 | 459 / 459 | 100% | 20.41 | 1114 / 1118 |
brain | 99% | 3391.86 | 2628 / 2642 | 100% | 16.75 | 705 / 705 |
thymus | 100% | 6468.73 | 653 / 653 | 99% | 20.91 | 601 / 605 |
prostate | 100% | 4721.78 | 245 / 245 | 99% | 18.81 | 498 / 502 |
pancreas | 100% | 3019.90 | 327 / 328 | 99% | 16.46 | 177 / 178 |
bladder | 100% | 4624.19 | 21 / 21 | 99% | 14.92 | 499 / 504 |
kidney | 100% | 4293.31 | 89 / 89 | 99% | 18.99 | 892 / 901 |
uterus | 100% | 5696.12 | 170 / 170 | 98% | 15.91 | 451 / 459 |
adrenal gland | 100% | 4946.28 | 258 / 258 | 98% | 15.29 | 225 / 230 |
skin | 100% | 5293.58 | 1809 / 1809 | 96% | 15.61 | 454 / 472 |
liver | 100% | 2854.31 | 226 / 226 | 93% | 9.56 | 378 / 406 |
adipose | 100% | 5253.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 6166.90 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.50 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.28 | 1 / 1 |
blood vessel | 100% | 4390.91 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 2147.27 | 842 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 21.53 | 28 / 29 |
muscle | 95% | 1410.08 | 766 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 10.62 | 70 / 80 |
peripheral blood | 68% | 2316.50 | 633 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008589 | Biological process | regulation of smoothened signaling pathway |
GO_0060271 | Biological process | cilium assembly |
GO_0099041 | Biological process | vesicle tethering to Golgi |
GO_0035264 | Biological process | multicellular organism growth |
GO_0006886 | Biological process | intracellular protein transport |
GO_0060322 | Biological process | head development |
GO_0007507 | Biological process | heart development |
GO_0005930 | Cellular component | axoneme |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | WDR11 |
Protein name | WD repeat domain 11 WD repeat-containing protein 11 (Bromodomain and WD repeat-containing protein 2) (WD repeat-containing protein 15) |
Synonyms | BRWD2 KIAA1351 WDR15 |
Description | FUNCTION: Involved in the Hedgehog (Hh) signaling pathway, is essential for normal ciliogenesis . Regulates the proteolytic processing of GLI3 and cooperates with the transcription factor EMX1 in the induction of downstream Hh pathway gene expression and gonadotropin-releasing hormone production . WDR11 complex facilitates the tethering of Adaptor protein-1 complex (AP-1)-derived vesicles. WDR11 complex acts together with TBC1D23 to facilitate the golgin-mediated capture of vesicles generated using AP-1 . . |
Accessions | S4R3Z0 S4R3P9 Q9BZH6 ENST00000497136.6 ENST00000605543.5 ENST00000604585.5 S4R451 ENST00000263461.11 |