Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 28% ± 11% | |
mast cell | 14 studies | 27% ± 14% | |
macrophage | 11 studies | 32% ± 13% | |
endothelial cell of lymphatic vessel | 10 studies | 29% ± 13% | |
capillary endothelial cell | 9 studies | 34% ± 20% | |
fibroblast | 9 studies | 25% ± 9% | |
endothelial cell of artery | 8 studies | 30% ± 17% | |
alveolar macrophage | 6 studies | 30% ± 11% | |
vein endothelial cell | 5 studies | 34% ± 25% | |
neuron | 5 studies | 47% ± 26% | |
hematopoietic precursor cell | 4 studies | 18% ± 2% | |
myeloid cell | 4 studies | 21% ± 2% | |
epithelial cell | 4 studies | 31% ± 9% | |
endothelial cell of vascular tree | 4 studies | 26% ± 6% | |
pancreatic A cell | 3 studies | 30% ± 11% | |
type B pancreatic cell | 3 studies | 39% ± 7% | |
common myeloid progenitor | 3 studies | 30% ± 8% | |
hematopoietic stem cell | 3 studies | 18% ± 0% | |
squamous epithelial cell | 3 studies | 32% ± 14% | |
abnormal cell | 3 studies | 39% ± 15% | |
oligodendrocyte precursor cell | 3 studies | 24% ± 6% | |
basal cell | 3 studies | 23% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 21778.02 | 1808 / 1809 | 100% | 935.43 | 472 / 472 |
adrenal gland | 100% | 30862.29 | 258 / 258 | 100% | 490.27 | 229 / 230 |
thymus | 100% | 9330.71 | 650 / 653 | 100% | 243.88 | 602 / 605 |
breast | 100% | 17984.23 | 459 / 459 | 98% | 240.69 | 1101 / 1118 |
kidney | 100% | 8119.61 | 89 / 89 | 98% | 335.29 | 886 / 901 |
uterus | 100% | 15373.39 | 170 / 170 | 98% | 165.88 | 449 / 459 |
prostate | 100% | 8613.07 | 245 / 245 | 97% | 125.22 | 489 / 502 |
lung | 100% | 14631.04 | 578 / 578 | 97% | 166.56 | 1122 / 1155 |
bladder | 100% | 13829.19 | 21 / 21 | 95% | 187.09 | 479 / 504 |
esophagus | 100% | 12043.43 | 1445 / 1445 | 95% | 113.68 | 173 / 183 |
ovary | 100% | 19963.47 | 180 / 180 | 93% | 116.20 | 400 / 430 |
pancreas | 94% | 4719.23 | 307 / 328 | 98% | 213.50 | 175 / 178 |
intestine | 99% | 10327.82 | 960 / 966 | 88% | 98.96 | 466 / 527 |
stomach | 93% | 5751.17 | 333 / 359 | 86% | 102.40 | 245 / 286 |
brain | 74% | 4425.67 | 1963 / 2642 | 100% | 191.93 | 702 / 705 |
liver | 47% | 1712.15 | 106 / 226 | 90% | 132.76 | 364 / 406 |
adipose | 100% | 21081.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 1254.15 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 229.59 | 1 / 1 |
blood vessel | 100% | 11819.61 | 1333 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 5018.64 | 239 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 103.40 | 28 / 29 |
heart | 96% | 5794.95 | 827 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 96.97 | 43 / 45 |
peripheral blood | 50% | 2090.80 | 466 / 929 | 0% | 0 | 0 / 0 |
muscle | 31% | 1110.93 | 249 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010637 | Biological process | negative regulation of mitochondrial fusion |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0016020 | Cellular component | membrane |
GO_0016491 | Molecular function | oxidoreductase activity |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | VAT1 |
Protein name | Vesicle amine transport 1 Synaptic vesicle membrane protein VAT-1 homolog (EC 1.-.-.-) |
Synonyms | |
Description | FUNCTION: Possesses ATPase activity (By similarity). Plays a part in calcium-regulated keratinocyte activation in epidermal repair mechanisms. Has no effect on cell proliferation. Negatively regulates mitochondrial fusion in cooperation with mitofusin proteins (MFN1-2). . |
Accessions | K7ER81 ENST00000589828.1 ENST00000355653.8 [Q99536-1] K7EJM4 ENST00000587062.1 K7ENX2 ENST00000587173.5 [Q99536-3] ENST00000592388.1 K7EM19 K7ERT7 Q99536 ENST00000589709.1 ENST00000587147.1 ENST00000420567.7 [Q99536-2] K7ESA3 ENST00000590924.5 |