Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 25% ± 8% | |
astrocyte | 7 studies | 30% ± 11% | |
oligodendrocyte | 7 studies | 25% ± 7% | |
microglial cell | 6 studies | 23% ± 6% | |
GABAergic neuron | 6 studies | 35% ± 18% | |
macrophage | 5 studies | 23% ± 5% | |
interneuron | 5 studies | 33% ± 22% | |
B cell | 4 studies | 19% ± 2% | |
epithelial cell | 4 studies | 40% ± 8% | |
ciliated cell | 4 studies | 27% ± 10% | |
retinal cone cell | 4 studies | 18% ± 2% | |
glutamatergic neuron | 4 studies | 50% ± 17% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
classical monocyte | 3 studies | 23% ± 5% | |
myeloid cell | 3 studies | 23% ± 6% | |
basal cell | 3 studies | 27% ± 12% | |
lymphocyte | 3 studies | 20% ± 2% | |
retinal rod cell | 3 studies | 17% ± 1% | |
naive B cell | 3 studies | 16% ± 1% | |
monocyte | 3 studies | 17% ± 2% | |
endothelial cell of lymphatic vessel | 3 studies | 20% ± 3% | |
neuron | 3 studies | 32% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3142.63 | 1445 / 1445 | 100% | 27.21 | 183 / 183 |
breast | 100% | 3283.35 | 459 / 459 | 99% | 21.63 | 1107 / 1118 |
prostate | 100% | 3087.84 | 245 / 245 | 99% | 16.08 | 496 / 502 |
uterus | 100% | 4312.47 | 170 / 170 | 99% | 21.44 | 453 / 459 |
brain | 100% | 2560.94 | 2636 / 2642 | 99% | 20.62 | 695 / 705 |
lung | 100% | 3548.08 | 578 / 578 | 98% | 21.57 | 1135 / 1155 |
thymus | 100% | 3350.66 | 653 / 653 | 98% | 17.25 | 593 / 605 |
pancreas | 99% | 1790.22 | 326 / 328 | 98% | 13.23 | 174 / 178 |
ovary | 100% | 4130.97 | 180 / 180 | 96% | 14.11 | 413 / 430 |
bladder | 100% | 3303.38 | 21 / 21 | 96% | 14.53 | 483 / 504 |
stomach | 100% | 2239.99 | 359 / 359 | 95% | 13.53 | 272 / 286 |
intestine | 100% | 3355.82 | 966 / 966 | 95% | 11.55 | 501 / 527 |
skin | 100% | 4451.25 | 1809 / 1809 | 94% | 14.95 | 443 / 472 |
kidney | 100% | 1837.56 | 89 / 89 | 93% | 12.93 | 838 / 901 |
adrenal gland | 100% | 2953.65 | 258 / 258 | 88% | 9.06 | 203 / 230 |
liver | 98% | 1009.33 | 221 / 226 | 60% | 4.90 | 244 / 406 |
adipose | 100% | 3248.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2768.12 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 3311.40 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.27 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.81 | 1 / 1 |
muscle | 99% | 1541.30 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1604.02 | 835 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 3483.55 | 882 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 13.18 | 27 / 29 |
eye | 0% | 0 | 0 / 0 | 65% | 5.33 | 52 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0034098 | Cellular component | VCP-NPL4-UFD1 AAA ATPase complex |
GO_0005634 | Cellular component | nucleus |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0005515 | Molecular function | protein binding |
GO_0043130 | Molecular function | ubiquitin binding |
Gene name | UBXN7 |
Protein name | UBX domain-containing protein 7 UBX domain protein 7 |
Synonyms | UBXD7 KIAA0794 |
Description | FUNCTION: Ubiquitin-binding adapter that links a subset of NEDD8-associated cullin ring ligases (CRLs) to the segregase VCP/p97, to regulate turnover of their ubiquitination substrates. . |
Accessions | ENST00000296328.9 ENST00000413584.1 O94888 C9JD50 H7BYF4 ENST00000428095.1 ENST00000429160.1 F8WB69 C9JAT7 ENST00000381887.7 |