Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| fibroblast | 16 studies | 25% ± 7% | |
| smooth muscle cell | 12 studies | 25% ± 8% | |
| astrocyte | 11 studies | 31% ± 14% | |
| neuron | 9 studies | 53% ± 28% | |
| glutamatergic neuron | 9 studies | 46% ± 18% | |
| pericyte | 9 studies | 22% ± 5% | |
| GABAergic neuron | 8 studies | 41% ± 18% | |
| connective tissue cell | 7 studies | 25% ± 7% | |
| endothelial cell | 7 studies | 22% ± 5% | |
| retinal ganglion cell | 7 studies | 69% ± 28% | |
| retina horizontal cell | 6 studies | 64% ± 21% | |
| basal cell | 6 studies | 23% ± 8% | |
| interneuron | 6 studies | 51% ± 15% | |
| amacrine cell | 5 studies | 51% ± 23% | |
| epithelial cell | 5 studies | 36% ± 9% | |
| ciliated cell | 4 studies | 27% ± 11% | |
| myofibroblast cell | 4 studies | 26% ± 7% | |
| endothelial cell of lymphatic vessel | 4 studies | 24% ± 4% | |
| abnormal cell | 4 studies | 25% ± 11% | |
| goblet cell | 4 studies | 19% ± 5% | |
| respiratory goblet cell | 3 studies | 34% ± 13% | |
| kidney loop of Henle epithelial cell | 3 studies | 25% ± 5% | |
| retinal bipolar neuron | 3 studies | 29% ± 12% | |
| OFF-bipolar cell | 3 studies | 53% ± 33% | |
| microglial cell | 3 studies | 18% ± 1% | |
| GABAergic amacrine cell | 3 studies | 39% ± 10% | |
| glycinergic amacrine cell | 3 studies | 27% ± 10% | |
| enterocyte | 3 studies | 17% ± 1% | |
| capillary endothelial cell | 3 studies | 17% ± 1% | |
| erythrocyte | 3 studies | 22% ± 5% | |
| Mueller cell | 3 studies | 45% ± 6% | |
| luminal hormone-sensing cell of mammary gland | 3 studies | 19% ± 2% | |
| oligodendrocyte precursor cell | 3 studies | 27% ± 9% | |
| enteroendocrine cell | 3 studies | 23% ± 8% | |
| keratinocyte | 3 studies | 43% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 9576.15 | 2630 / 2642 | 100% | 220.39 | 705 / 705 |
| skin | 99% | 3216.47 | 1790 / 1809 | 99% | 146.06 | 469 / 472 |
| esophagus | 96% | 2125.88 | 1391 / 1445 | 91% | 49.74 | 166 / 183 |
| breast | 71% | 1311.49 | 328 / 459 | 90% | 41.14 | 1004 / 1118 |
| liver | 62% | 900.33 | 140 / 226 | 94% | 76.30 | 380 / 406 |
| intestine | 78% | 1561.92 | 753 / 966 | 71% | 24.66 | 374 / 527 |
| uterus | 63% | 927.16 | 107 / 170 | 86% | 46.89 | 394 / 459 |
| stomach | 59% | 800.10 | 213 / 359 | 76% | 28.74 | 217 / 286 |
| pancreas | 38% | 415.48 | 123 / 328 | 95% | 43.98 | 169 / 178 |
| prostate | 27% | 270.78 | 65 / 245 | 97% | 78.73 | 488 / 502 |
| kidney | 54% | 631.55 | 48 / 89 | 61% | 20.19 | 554 / 901 |
| lung | 24% | 248.13 | 139 / 578 | 83% | 37.27 | 961 / 1155 |
| bladder | 38% | 460.14 | 8 / 21 | 67% | 32.90 | 340 / 504 |
| eye | 0% | 0 | 0 / 0 | 98% | 60.19 | 78 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 91% | 59.38 | 41 / 45 |
| adrenal gland | 7% | 102.68 | 19 / 258 | 76% | 54.30 | 174 / 230 |
| adipose | 74% | 1531.31 | 895 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 55% | 41.75 | 16 / 29 |
| blood vessel | 49% | 623.51 | 658 / 1335 | 0% | 0 | 0 / 0 |
| ovary | 17% | 253.58 | 31 / 180 | 31% | 8.09 | 132 / 430 |
| heart | 29% | 275.98 | 247 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 28% | 390.92 | 256 / 929 | 0% | 0 | 0 / 0 |
| thymus | 9% | 88.04 | 59 / 653 | 14% | 3.08 | 82 / 605 |
| muscle | 11% | 119.97 | 88 / 803 | 0% | 0 | 0 / 0 |
| spleen | 2% | 22.04 | 4 / 241 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0021987 | Biological process | cerebral cortex development |
| GO_0000278 | Biological process | mitotic cell cycle |
| GO_0000226 | Biological process | microtubule cytoskeleton organization |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_1903561 | Cellular component | extracellular vesicle |
| GO_0015630 | Cellular component | microtubule cytoskeleton |
| GO_0005874 | Cellular component | microtubule |
| GO_0045171 | Cellular component | intercellular bridge |
| GO_0072686 | Cellular component | mitotic spindle |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0005525 | Molecular function | GTP binding |
| GO_0005200 | Molecular function | structural constituent of cytoskeleton |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0003924 | Molecular function | GTPase activity |
| Gene name | TUBB2A |
| Protein name | Tubulin beta-2A chain (Tubulin beta class IIa) Tubulin beta chain |
| Synonyms | TUBB2 |
| Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
| Accessions | A5D907 A5D906 Q13885 ENST00000333628.4 |