Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 16 studies | 25% ± 7% | |
smooth muscle cell | 12 studies | 25% ± 8% | |
astrocyte | 11 studies | 31% ± 14% | |
neuron | 9 studies | 53% ± 28% | |
glutamatergic neuron | 9 studies | 46% ± 18% | |
pericyte | 9 studies | 22% ± 5% | |
GABAergic neuron | 8 studies | 41% ± 18% | |
connective tissue cell | 7 studies | 25% ± 7% | |
endothelial cell | 7 studies | 22% ± 5% | |
retinal ganglion cell | 7 studies | 69% ± 28% | |
retina horizontal cell | 6 studies | 64% ± 21% | |
basal cell | 6 studies | 23% ± 8% | |
interneuron | 6 studies | 51% ± 15% | |
amacrine cell | 5 studies | 51% ± 23% | |
epithelial cell | 5 studies | 36% ± 9% | |
ciliated cell | 4 studies | 27% ± 11% | |
myofibroblast cell | 4 studies | 26% ± 7% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 4% | |
abnormal cell | 4 studies | 25% ± 11% | |
goblet cell | 4 studies | 19% ± 5% | |
respiratory goblet cell | 3 studies | 34% ± 13% | |
kidney loop of Henle epithelial cell | 3 studies | 25% ± 5% | |
retinal bipolar neuron | 3 studies | 29% ± 12% | |
OFF-bipolar cell | 3 studies | 53% ± 33% | |
microglial cell | 3 studies | 18% ± 1% | |
GABAergic amacrine cell | 3 studies | 39% ± 10% | |
glycinergic amacrine cell | 3 studies | 27% ± 10% | |
enterocyte | 3 studies | 17% ± 1% | |
capillary endothelial cell | 3 studies | 17% ± 1% | |
erythrocyte | 3 studies | 22% ± 5% | |
Mueller cell | 3 studies | 45% ± 6% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 19% ± 2% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 9% | |
enteroendocrine cell | 3 studies | 23% ± 8% | |
keratinocyte | 3 studies | 43% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9576.15 | 2630 / 2642 | 100% | 220.39 | 705 / 705 |
skin | 99% | 3216.47 | 1790 / 1809 | 99% | 146.06 | 469 / 472 |
esophagus | 96% | 2125.88 | 1391 / 1445 | 91% | 49.74 | 166 / 183 |
breast | 71% | 1311.49 | 328 / 459 | 90% | 41.14 | 1004 / 1118 |
liver | 62% | 900.33 | 140 / 226 | 94% | 76.30 | 380 / 406 |
intestine | 78% | 1561.92 | 753 / 966 | 71% | 24.66 | 374 / 527 |
uterus | 63% | 927.16 | 107 / 170 | 86% | 46.89 | 394 / 459 |
stomach | 59% | 800.10 | 213 / 359 | 76% | 28.74 | 217 / 286 |
pancreas | 38% | 415.48 | 123 / 328 | 95% | 43.98 | 169 / 178 |
prostate | 27% | 270.78 | 65 / 245 | 97% | 78.73 | 488 / 502 |
kidney | 54% | 631.55 | 48 / 89 | 61% | 20.19 | 554 / 901 |
lung | 24% | 248.13 | 139 / 578 | 83% | 37.27 | 961 / 1155 |
bladder | 38% | 460.14 | 8 / 21 | 67% | 32.90 | 340 / 504 |
eye | 0% | 0 | 0 / 0 | 98% | 60.19 | 78 / 80 |
tonsil | 0% | 0 | 0 / 0 | 91% | 59.38 | 41 / 45 |
adrenal gland | 7% | 102.68 | 19 / 258 | 76% | 54.30 | 174 / 230 |
adipose | 74% | 1531.31 | 895 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 55% | 41.75 | 16 / 29 |
blood vessel | 49% | 623.51 | 658 / 1335 | 0% | 0 | 0 / 0 |
ovary | 17% | 253.58 | 31 / 180 | 31% | 8.09 | 132 / 430 |
heart | 29% | 275.98 | 247 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 390.92 | 256 / 929 | 0% | 0 | 0 / 0 |
thymus | 9% | 88.04 | 59 / 653 | 14% | 3.08 | 82 / 605 |
muscle | 11% | 119.97 | 88 / 803 | 0% | 0 | 0 / 0 |
spleen | 2% | 22.04 | 4 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0021987 | Biological process | cerebral cortex development |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0070062 | Cellular component | extracellular exosome |
GO_1903561 | Cellular component | extracellular vesicle |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005874 | Cellular component | microtubule |
GO_0045171 | Cellular component | intercellular bridge |
GO_0072686 | Cellular component | mitotic spindle |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | TUBB2A |
Protein name | Tubulin beta-2A chain (Tubulin beta class IIa) Tubulin beta chain |
Synonyms | TUBB2 |
Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
Accessions | A5D907 A5D906 Q13885 ENST00000333628.4 |