Name | Number of supported studies | Average coverage | |
---|---|---|---|
naive thymus-derived CD4-positive, alpha-beta T cell | 10 studies | 32% ± 9% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 10 studies | 29% ± 12% | |
CD4-positive, alpha-beta T cell | 7 studies | 24% ± 12% | |
epithelial cell | 4 studies | 27% ± 10% | |
intestinal crypt stem cell | 4 studies | 30% ± 10% | |
effector memory CD4-positive, alpha-beta T cell | 3 studies | 22% ± 5% | |
goblet cell | 3 studies | 22% ± 7% | |
T follicular helper cell | 3 studies | 22% ± 4% | |
transit amplifying cell | 3 studies | 20% ± 2% | |
T cell | 3 studies | 19% ± 4% |
Insufficient scRNA-seq data for expression of TRABD2A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 71% | 1635.07 | 684 / 966 | 95% | 36.83 | 503 / 527 |
lung | 98% | 244.03 | 568 / 578 | 58% | 2.95 | 670 / 1155 |
ovary | 97% | 3496.95 | 174 / 180 | 47% | 1.71 | 202 / 430 |
thymus | 53% | 76.93 | 347 / 653 | 80% | 3.12 | 482 / 605 |
breast | 97% | 297.80 | 447 / 459 | 21% | 0.54 | 240 / 1118 |
skin | 74% | 356.13 | 1341 / 1809 | 38% | 2.04 | 179 / 472 |
stomach | 19% | 19.32 | 70 / 359 | 91% | 25.07 | 259 / 286 |
spleen | 100% | 472.33 | 241 / 241 | 0% | 0 | 0 / 0 |
bladder | 52% | 55.24 | 11 / 21 | 46% | 10.97 | 234 / 504 |
adipose | 98% | 237.95 | 1180 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 440.19 | 842 / 929 | 0% | 0 | 0 / 0 |
kidney | 48% | 63.88 | 43 / 89 | 39% | 1.67 | 351 / 901 |
pancreas | 1% | 0.43 | 2 / 328 | 77% | 3.77 | 137 / 178 |
lymph node | 0% | 0 | 0 / 0 | 76% | 3.07 | 22 / 29 |
brain | 56% | 108.92 | 1492 / 2642 | 18% | 0.40 | 126 / 705 |
esophagus | 18% | 17.56 | 255 / 1445 | 53% | 4.20 | 97 / 183 |
liver | 25% | 28.30 | 57 / 226 | 38% | 1.66 | 155 / 406 |
uterus | 32% | 33.38 | 54 / 170 | 31% | 1.62 | 141 / 459 |
tonsil | 0% | 0 | 0 / 0 | 42% | 1.38 | 19 / 45 |
eye | 0% | 0 | 0 / 0 | 38% | 1.50 | 30 / 80 |
prostate | 23% | 23.24 | 56 / 245 | 7% | 0.18 | 35 / 502 |
adrenal gland | 12% | 13.89 | 30 / 258 | 6% | 0.44 | 14 / 230 |
blood vessel | 17% | 20.36 | 222 / 1335 | 0% | 0 | 0 / 0 |
heart | 12% | 10.33 | 101 / 861 | 0% | 0 | 0 / 0 |
muscle | 1% | 0.79 | 6 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030178 | Biological process | negative regulation of Wnt signaling pathway |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0060322 | Biological process | head development |
GO_1904808 | Biological process | positive regulation of protein oxidation |
GO_0006508 | Biological process | proteolysis |
GO_0031334 | Biological process | positive regulation of protein-containing complex assembly |
GO_0031090 | Cellular component | organelle membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0017147 | Molecular function | Wnt-protein binding |
GO_0004222 | Molecular function | metalloendopeptidase activity |
GO_0004175 | Molecular function | endopeptidase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | TRABD2A |
Protein name | Metalloprotease TIKI (EC 3.4.-.-) (TRAB domain-containing protein 2) Metalloprotease TIKI1 (EC 3.4.-.-) (TRAB domain-containing protein 2A) |
Synonyms | C2orf89 TIKI1 |
Description | FUNCTION: Metalloprotease that acts as a negative regulator of the Wnt signaling pathway by mediating the cleavage of the 8 N-terminal residues of a subset of Wnt proteins. Following cleavage, Wnt proteins become oxidized and form large disulfide-bond oligomers, leading to their inactivation. Able to cleave WNT3A, WNT5, but not WNT11. Required for head formation. . FUNCTION: Metalloprotease that acts as a negative regulator of the Wnt signaling pathway by mediating the cleavage of the N-terminal residues of a subset of Wnt proteins. Following cleavage, Wnt proteins become oxidized and form large disulfide-bond oligomers, leading to their inactivation. . |
Accessions | C9IYB5 ENST00000409520.7 [Q86V40-1] ENST00000335459.9 [Q86V40-2] Q86V40 ENST00000409133.1 |