Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 51% ± 26% | |
endothelial cell | 11 studies | 29% ± 12% | |
basal cell | 10 studies | 29% ± 13% | |
vein endothelial cell | 9 studies | 23% ± 14% | |
epithelial cell | 8 studies | 48% ± 21% | |
endothelial cell of vascular tree | 8 studies | 23% ± 6% | |
duct epithelial cell | 4 studies | 31% ± 19% | |
respiratory goblet cell | 4 studies | 18% ± 3% | |
secretory cell | 4 studies | 25% ± 6% | |
club cell | 4 studies | 22% ± 3% | |
type II pneumocyte | 4 studies | 25% ± 9% | |
retinal pigment epithelial cell | 4 studies | 38% ± 27% | |
mucus secreting cell | 4 studies | 44% ± 7% | |
cardiac muscle cell | 4 studies | 26% ± 3% | |
kidney loop of Henle epithelial cell | 3 studies | 24% ± 3% | |
brush cell | 3 studies | 28% ± 7% | |
fibroblast | 3 studies | 55% ± 21% | |
GABAergic neuron | 3 studies | 27% ± 5% | |
glutamatergic neuron | 3 studies | 25% ± 8% | |
mesothelial cell | 3 studies | 28% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 2286.16 | 243 / 245 | 98% | 18.20 | 492 / 502 |
breast | 99% | 2416.65 | 456 / 459 | 90% | 25.96 | 1009 / 1118 |
thymus | 99% | 2281.74 | 649 / 653 | 87% | 48.58 | 529 / 605 |
uterus | 84% | 877.93 | 143 / 170 | 91% | 22.04 | 416 / 459 |
ovary | 77% | 875.99 | 139 / 180 | 97% | 24.34 | 416 / 430 |
bladder | 100% | 3370.86 | 21 / 21 | 73% | 12.25 | 369 / 504 |
pancreas | 99% | 1312.25 | 325 / 328 | 63% | 5.81 | 112 / 178 |
liver | 100% | 1635.85 | 225 / 226 | 62% | 6.28 | 250 / 406 |
kidney | 98% | 1921.88 | 87 / 89 | 60% | 10.93 | 539 / 901 |
intestine | 77% | 1230.12 | 743 / 966 | 76% | 10.08 | 399 / 527 |
esophagus | 74% | 3063.16 | 1063 / 1445 | 75% | 15.71 | 137 / 183 |
brain | 82% | 3854.38 | 2175 / 2642 | 62% | 8.67 | 435 / 705 |
adrenal gland | 100% | 14472.11 | 258 / 258 | 43% | 15.34 | 98 / 230 |
stomach | 88% | 1678.90 | 317 / 359 | 51% | 6.94 | 147 / 286 |
skin | 74% | 1797.64 | 1342 / 1809 | 34% | 5.75 | 159 / 472 |
lung | 36% | 291.32 | 209 / 578 | 71% | 18.36 | 822 / 1155 |
muscle | 100% | 3851.51 | 803 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 1811.44 | 1308 / 1335 | 0% | 0 | 0 / 0 |
adipose | 98% | 1824.48 | 1174 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 18.72 | 42 / 45 |
heart | 79% | 1141.38 | 679 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 9% | 1.46 | 7 / 80 |
spleen | 1% | 6.61 | 2 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 5.64 | 5 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043406 | Biological process | positive regulation of MAP kinase activity |
GO_0000086 | Biological process | G2/M transition of mitotic cell cycle |
GO_2001235 | Biological process | positive regulation of apoptotic signaling pathway |
GO_0046330 | Biological process | positive regulation of JNK cascade |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TPD52L1 |
Protein name | TPD52 like 1 Tumor protein D53 (hD53) (Tumor protein D52-like 1) |
Synonyms | |
Description | |
Accessions | ENST00000534368.5 J3KNE7 ENST00000534000.6 [Q16890-1] ENST00000528193.5 ENST00000368388.6 [Q16890-3] ENST00000392482.6 [Q16890-4] E9PNQ9 ENST00000304877.17 ENST00000532429.5 [Q16890-5] ENST00000527711.5 E9PPQ1 Q16890 ENST00000534199.5 [Q16890-4] ENST00000524679.1 [Q16890-4] E9PNK6 ENST00000368402.9 [Q16890-2] |