Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 13 studies | 30% ± 11% | |
pericyte | 12 studies | 23% ± 8% | |
fibroblast | 12 studies | 22% ± 5% | |
smooth muscle cell | 10 studies | 24% ± 6% | |
endothelial cell | 10 studies | 23% ± 5% | |
oligodendrocyte | 10 studies | 26% ± 10% | |
ciliated cell | 8 studies | 28% ± 15% | |
epithelial cell | 6 studies | 37% ± 21% | |
retinal rod cell | 6 studies | 27% ± 9% | |
adipocyte | 6 studies | 28% ± 14% | |
T cell | 5 studies | 27% ± 15% | |
retinal cone cell | 5 studies | 28% ± 9% | |
basal cell | 5 studies | 22% ± 6% | |
connective tissue cell | 5 studies | 21% ± 6% | |
myofibroblast cell | 4 studies | 19% ± 2% | |
cardiac muscle cell | 4 studies | 21% ± 1% | |
Mueller cell | 4 studies | 25% ± 9% | |
glutamatergic neuron | 4 studies | 30% ± 7% | |
oligodendrocyte precursor cell | 4 studies | 27% ± 5% | |
plasmacytoid dendritic cell | 3 studies | 26% ± 10% | |
macrophage | 3 studies | 20% ± 4% | |
muscle cell | 3 studies | 22% ± 4% | |
type I pneumocyte | 3 studies | 22% ± 3% | |
GABAergic neuron | 3 studies | 27% ± 5% | |
abnormal cell | 3 studies | 20% ± 2% | |
goblet cell | 3 studies | 18% ± 1% | |
interneuron | 3 studies | 27% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5584.08 | 245 / 245 | 100% | 99.91 | 502 / 502 |
esophagus | 100% | 7451.38 | 1444 / 1445 | 100% | 69.12 | 183 / 183 |
thymus | 100% | 8421.51 | 653 / 653 | 100% | 113.28 | 604 / 605 |
bladder | 100% | 4605.67 | 21 / 21 | 100% | 51.40 | 503 / 504 |
intestine | 100% | 5925.19 | 966 / 966 | 100% | 60.60 | 525 / 527 |
lung | 100% | 4606.82 | 577 / 578 | 100% | 57.46 | 1152 / 1155 |
breast | 100% | 5615.57 | 459 / 459 | 100% | 69.89 | 1113 / 1118 |
ovary | 100% | 7718.93 | 180 / 180 | 100% | 62.17 | 428 / 430 |
stomach | 100% | 5488.64 | 358 / 359 | 100% | 62.18 | 285 / 286 |
uterus | 100% | 5825.35 | 170 / 170 | 99% | 51.70 | 454 / 459 |
brain | 99% | 5187.46 | 2612 / 2642 | 100% | 108.53 | 705 / 705 |
skin | 100% | 5526.20 | 1809 / 1809 | 99% | 51.49 | 466 / 472 |
kidney | 100% | 3968.98 | 89 / 89 | 99% | 63.63 | 888 / 901 |
pancreas | 91% | 2466.61 | 297 / 328 | 99% | 63.02 | 177 / 178 |
adrenal gland | 100% | 5583.38 | 258 / 258 | 90% | 32.95 | 206 / 230 |
liver | 99% | 2914.38 | 224 / 226 | 90% | 33.83 | 366 / 406 |
adipose | 100% | 6999.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 10983.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 49.21 | 29 / 29 |
spleen | 100% | 3710.58 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 37.50 | 1 / 1 |
muscle | 100% | 10239.97 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 4846.43 | 843 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 44.13 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 98% | 37.43 | 78 / 80 |
peripheral blood | 37% | 1152.55 | 343 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0007292 | Biological process | female gamete generation |
GO_0045778 | Biological process | positive regulation of ossification |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0030316 | Biological process | osteoclast differentiation |
GO_0045671 | Biological process | negative regulation of osteoclast differentiation |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0042809 | Molecular function | nuclear vitamin D receptor binding |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TOB2 |
Protein name | Protein Tob2 (Protein Tob4) (Transducer of erbB-2 2) Transducer of ERBB2, 2 |
Synonyms | KIAA1663 TROB2 TOB4 |
Description | FUNCTION: Anti-proliferative protein inhibits cell cycle progression from the G0/G1 to S phases. |
Accessions | Q14106 B0QXZ4 ENST00000434408.1 ENST00000327492.4 [Q14106-1] |