Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 27% ± 10% | |
microglial cell | 12 studies | 39% ± 13% | |
oligodendrocyte precursor cell | 11 studies | 36% ± 14% | |
oligodendrocyte | 11 studies | 34% ± 13% | |
glutamatergic neuron | 10 studies | 51% ± 25% | |
astrocyte | 10 studies | 34% ± 19% | |
GABAergic neuron | 9 studies | 46% ± 26% | |
macrophage | 9 studies | 35% ± 11% | |
adipocyte | 8 studies | 22% ± 5% | |
neuron | 6 studies | 34% ± 18% | |
interneuron | 5 studies | 55% ± 27% | |
cardiac muscle cell | 5 studies | 43% ± 13% | |
myeloid cell | 5 studies | 31% ± 14% | |
endothelial cell of lymphatic vessel | 5 studies | 22% ± 3% | |
fibroblast | 5 studies | 25% ± 7% | |
pericyte | 4 studies | 17% ± 1% | |
smooth muscle cell | 4 studies | 22% ± 4% | |
GABAergic interneuron | 3 studies | 40% ± 3% | |
epithelial cell | 3 studies | 55% ± 27% | |
retinal rod cell | 3 studies | 19% ± 3% | |
hepatocyte | 3 studies | 48% ± 19% | |
connective tissue cell | 3 studies | 20% ± 4% | |
mast cell | 3 studies | 31% ± 13% | |
alveolar macrophage | 3 studies | 25% ± 4% | |
lymphocyte | 3 studies | 23% ± 1% | |
mucus secreting cell | 3 studies | 27% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 533.68 | 1444 / 1445 | 99% | 15.15 | 182 / 183 |
skin | 100% | 683.18 | 1806 / 1809 | 99% | 22.00 | 468 / 472 |
prostate | 100% | 410.49 | 245 / 245 | 98% | 6.56 | 493 / 502 |
stomach | 100% | 293.69 | 359 / 359 | 98% | 9.82 | 280 / 286 |
intestine | 100% | 467.41 | 966 / 966 | 98% | 9.45 | 515 / 527 |
brain | 98% | 286.86 | 2583 / 2642 | 100% | 10.33 | 703 / 705 |
bladder | 100% | 472.19 | 21 / 21 | 97% | 11.27 | 489 / 504 |
uterus | 100% | 386.67 | 170 / 170 | 97% | 12.70 | 445 / 459 |
thymus | 100% | 280.54 | 651 / 653 | 97% | 10.46 | 587 / 605 |
pancreas | 98% | 157.69 | 320 / 328 | 98% | 7.36 | 175 / 178 |
breast | 100% | 308.09 | 459 / 459 | 93% | 5.74 | 1043 / 1118 |
ovary | 100% | 277.06 | 180 / 180 | 91% | 6.16 | 392 / 430 |
adrenal gland | 100% | 269.69 | 258 / 258 | 90% | 4.91 | 207 / 230 |
lung | 94% | 161.27 | 545 / 578 | 93% | 11.17 | 1069 / 1155 |
kidney | 100% | 244.49 | 89 / 89 | 87% | 5.31 | 782 / 901 |
liver | 96% | 148.39 | 217 / 226 | 76% | 3.69 | 307 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 24.81 | 80 / 80 |
tonsil | 0% | 0 | 0 / 0 | 100% | 12.04 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.00 | 1 / 1 |
adipose | 100% | 286.14 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 474.72 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 249.30 | 793 / 803 | 0% | 0 | 0 / 0 |
spleen | 97% | 135.73 | 234 / 241 | 0% | 0 | 0 / 0 |
heart | 94% | 359.57 | 808 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 3.13 | 24 / 29 |
peripheral blood | 20% | 56.53 | 188 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070059 | Biological process | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005886 | Cellular component | plasma membrane |
GO_0003674 | Molecular function | molecular_function |
Gene name | TMEM117 |
Protein name | TMEM117 protein Transmembrane protein 117 |
Synonyms | |
Description | FUNCTION: Involved in endoplasmic reticulum (ER) stress-induced cell death pathway. . |
Accessions | ENST00000551577.5 ENST00000546868.5 F8VS00 H0YI63 F8W1J2 ENST00000550495.1 Q9H0C3 ENST00000266534.8 Q05C15 |