Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 32 studies | 31% ± 12% | |
astrocyte | 16 studies | 40% ± 19% | |
oligodendrocyte precursor cell | 14 studies | 43% ± 18% | |
endothelial cell of artery | 13 studies | 38% ± 16% | |
GABAergic neuron | 11 studies | 52% ± 21% | |
endothelial cell of lymphatic vessel | 10 studies | 35% ± 14% | |
glutamatergic neuron | 9 studies | 41% ± 20% | |
interneuron | 6 studies | 67% ± 22% | |
retina horizontal cell | 6 studies | 64% ± 18% | |
retinal cone cell | 6 studies | 44% ± 24% | |
vein endothelial cell | 6 studies | 34% ± 25% | |
endothelial cell of vascular tree | 6 studies | 36% ± 25% | |
podocyte | 5 studies | 78% ± 16% | |
retinal bipolar neuron | 5 studies | 40% ± 13% | |
neuron | 5 studies | 41% ± 21% | |
amacrine cell | 5 studies | 27% ± 10% | |
fibroblast | 5 studies | 23% ± 10% | |
adipocyte | 5 studies | 38% ± 17% | |
type I pneumocyte | 5 studies | 29% ± 7% | |
pericyte | 4 studies | 28% ± 16% | |
OFF-bipolar cell | 4 studies | 61% ± 31% | |
Mueller cell | 4 studies | 31% ± 16% | |
renal principal cell | 4 studies | 56% ± 24% | |
GABAergic interneuron | 3 studies | 51% ± 7% | |
granule cell | 3 studies | 37% ± 12% | |
GABAergic amacrine cell | 3 studies | 41% ± 13% | |
ON-bipolar cell | 3 studies | 50% ± 17% | |
glycinergic amacrine cell | 3 studies | 55% ± 19% | |
retinal pigment epithelial cell | 3 studies | 28% ± 6% | |
capillary endothelial cell | 3 studies | 28% ± 10% | |
kidney loop of Henle epithelial cell | 3 studies | 42% ± 19% | |
renal alpha-intercalated cell | 3 studies | 57% ± 27% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 611.39 | 2570 / 2642 | 98% | 10.72 | 688 / 705 |
kidney | 100% | 1519.03 | 89 / 89 | 92% | 10.37 | 831 / 901 |
prostate | 99% | 1102.71 | 242 / 245 | 89% | 7.33 | 449 / 502 |
adrenal gland | 94% | 322.25 | 242 / 258 | 85% | 6.17 | 195 / 230 |
thymus | 100% | 736.28 | 650 / 653 | 70% | 2.14 | 425 / 605 |
breast | 100% | 1272.15 | 459 / 459 | 64% | 1.69 | 714 / 1118 |
lung | 95% | 475.12 | 550 / 578 | 49% | 1.90 | 569 / 1155 |
bladder | 100% | 1014.14 | 21 / 21 | 30% | 1.05 | 151 / 504 |
uterus | 99% | 1322.24 | 169 / 170 | 29% | 1.25 | 132 / 459 |
esophagus | 86% | 384.88 | 1243 / 1445 | 39% | 1.24 | 71 / 183 |
ovary | 87% | 619.73 | 157 / 180 | 35% | 1.22 | 151 / 430 |
intestine | 90% | 482.09 | 870 / 966 | 22% | 0.60 | 118 / 527 |
pancreas | 25% | 61.51 | 83 / 328 | 81% | 2.75 | 144 / 178 |
adipose | 100% | 1303.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
stomach | 58% | 241.19 | 209 / 359 | 39% | 0.92 | 112 / 286 |
spleen | 88% | 258.58 | 212 / 241 | 0% | 0 | 0 / 0 |
skin | 58% | 201.28 | 1054 / 1809 | 22% | 1.22 | 105 / 472 |
blood vessel | 77% | 348.02 | 1026 / 1335 | 0% | 0 | 0 / 0 |
liver | 32% | 63.74 | 72 / 226 | 41% | 1.19 | 168 / 406 |
heart | 67% | 207.12 | 576 / 861 | 0% | 0 | 0 / 0 |
muscle | 15% | 35.40 | 120 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.07 | 2 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
eye | 0% | 0 | 0 / 0 | 3% | 0.06 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0001525 | Biological process | angiogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0042995 | Cellular component | cell projection |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | THSD7A |
Protein name | Thrombospondin type-1 domain-containing protein 7A [Cleaved into: Thrombospondin type-1 domain-containing protein 7A, soluble form] |
Synonyms | KIAA0960 |
Description | FUNCTION: [Thrombospondin type-1 domain-containing protein 7A]: Plays a role in actin cytoskeleton rearrangement. .; FUNCTION: [Thrombospondin type-1 domain-containing protein 7A, soluble form]: The soluble form promotes endothelial cell migration and filopodia formation during sprouting angiogenesis via a FAK-dependent mechanism. . |
Accessions | ENST00000423059.9 Q9UPZ6 |