Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 19 studies | 47% ± 19% | |
microglial cell | 13 studies | 42% ± 16% | |
GABAergic neuron | 11 studies | 54% ± 24% | |
oligodendrocyte precursor cell | 11 studies | 26% ± 7% | |
glutamatergic neuron | 11 studies | 67% ± 20% | |
adipocyte | 10 studies | 42% ± 13% | |
interneuron | 6 studies | 56% ± 23% | |
endothelial cell | 5 studies | 47% ± 22% | |
fibroblast | 5 studies | 24% ± 6% | |
neuron | 4 studies | 49% ± 11% | |
epithelial cell | 4 studies | 37% ± 22% | |
Mueller cell | 4 studies | 65% ± 16% | |
amacrine cell | 4 studies | 45% ± 13% | |
retinal ganglion cell | 4 studies | 92% ± 8% | |
GABAergic interneuron | 3 studies | 50% ± 10% | |
macrophage | 3 studies | 33% ± 23% | |
GABAergic amacrine cell | 3 studies | 68% ± 7% | |
glycinergic amacrine cell | 3 studies | 41% ± 8% | |
ependymal cell | 3 studies | 47% ± 15% | |
ciliated cell | 3 studies | 22% ± 5% | |
basal cell | 3 studies | 45% ± 30% | |
oligodendrocyte | 3 studies | 34% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 94% | 1551.04 | 2479 / 2642 | 99% | 19.16 | 697 / 705 |
ovary | 98% | 6848.07 | 177 / 180 | 85% | 11.63 | 364 / 430 |
thymus | 100% | 2639.83 | 653 / 653 | 78% | 5.97 | 470 / 605 |
esophagus | 88% | 599.26 | 1272 / 1445 | 55% | 6.13 | 101 / 183 |
uterus | 86% | 581.66 | 146 / 170 | 50% | 3.53 | 231 / 459 |
adrenal gland | 97% | 789.10 | 251 / 258 | 37% | 2.60 | 86 / 230 |
breast | 61% | 347.10 | 282 / 459 | 63% | 3.37 | 707 / 1118 |
skin | 99% | 1306.31 | 1790 / 1809 | 25% | 1.30 | 119 / 472 |
lung | 39% | 164.02 | 228 / 578 | 67% | 5.29 | 779 / 1155 |
kidney | 52% | 283.75 | 46 / 89 | 35% | 1.87 | 311 / 901 |
tonsil | 0% | 0 | 0 / 0 | 78% | 5.87 | 35 / 45 |
pancreas | 6% | 24.30 | 21 / 328 | 70% | 3.43 | 125 / 178 |
adipose | 73% | 462.99 | 874 / 1204 | 0% | 0 | 0 / 0 |
bladder | 33% | 135.14 | 7 / 21 | 31% | 1.88 | 156 / 504 |
intestine | 45% | 185.22 | 430 / 966 | 18% | 0.77 | 97 / 527 |
stomach | 35% | 128.12 | 124 / 359 | 28% | 1.20 | 81 / 286 |
blood vessel | 59% | 249.17 | 781 / 1335 | 0% | 0 | 0 / 0 |
prostate | 47% | 197.35 | 114 / 245 | 6% | 0.21 | 32 / 502 |
heart | 11% | 41.13 | 95 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 0.27 | 6 / 80 |
muscle | 5% | 13.36 | 38 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.08 | 1 / 29 |
liver | 0% | 0 | 0 / 226 | 2% | 0.15 | 9 / 406 |
spleen | 2% | 3.96 | 4 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.36 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0031641 | Biological process | regulation of myelination |
GO_2000543 | Biological process | positive regulation of gastrulation |
GO_0060912 | Biological process | cardiac cell fate specification |
GO_0007165 | Biological process | signal transduction |
GO_0032289 | Biological process | central nervous system myelin formation |
GO_0060038 | Biological process | cardiac muscle cell proliferation |
GO_0048666 | Biological process | neuron development |
GO_0048714 | Biological process | positive regulation of oligodendrocyte differentiation |
GO_0031643 | Biological process | positive regulation of myelination |
GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0001702 | Biological process | gastrulation with mouth forming second |
GO_0005886 | Cellular component | plasma membrane |
GO_0043005 | Cellular component | neuron projection |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TENM4 |
Protein name | Teneurin-4 (Ten-4) (Protein Odd Oz/ten-m homolog 4) (Tenascin-M4) (Ten-m4) (Teneurin transmembrane protein 4) Teneurin transmembrane protein 4 |
Synonyms | ODZ4 KIAA1302 TNM4 |
Description | FUNCTION: Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Plays a role in the establishment of the anterior-posterior axis during gastrulation. Regulates the differentiation and cellular process formation of oligodendrocytes and myelination of small-diameter axons in the central nervous system (CNS) . Promotes activation of focal adhesion kinase. May function as a cellular signal transducer (By similarity). . |
Accessions | Q6N022 ENST00000278550.12 H0YCJ4 ENST00000533525.1 ENST00000533074.1 E9PPG4 H0YCW4 ENST00000530738.1 A0A0S2PZP6 |