Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 27% ± 12% | |
macrophage | 12 studies | 36% ± 14% | |
microglial cell | 10 studies | 37% ± 13% | |
B cell | 8 studies | 22% ± 8% | |
dendritic cell | 8 studies | 25% ± 6% | |
GABAergic neuron | 8 studies | 37% ± 20% | |
glutamatergic neuron | 6 studies | 47% ± 22% | |
interneuron | 6 studies | 38% ± 20% | |
myeloid cell | 6 studies | 24% ± 5% | |
neuron | 5 studies | 25% ± 6% | |
epithelial cell | 5 studies | 29% ± 7% | |
Mueller cell | 5 studies | 24% ± 5% | |
endothelial cell of lymphatic vessel | 5 studies | 25% ± 4% | |
type I pneumocyte | 4 studies | 26% ± 7% | |
GABAergic interneuron | 3 studies | 26% ± 8% | |
granule cell | 3 studies | 36% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 4% | |
plasma cell | 3 studies | 26% ± 10% | |
fibroblast | 3 studies | 23% ± 6% | |
ciliated cell | 3 studies | 30% ± 9% | |
glycinergic amacrine cell | 3 studies | 17% ± 0% | |
basal cell | 3 studies | 24% ± 8% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 31% ± 6% | |
alveolar macrophage | 3 studies | 27% ± 10% | |
monocyte | 3 studies | 27% ± 3% | |
adipocyte | 3 studies | 21% ± 3% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 41% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 35% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2224.57 | 244 / 245 | 99% | 43.38 | 498 / 502 |
breast | 100% | 6575.92 | 459 / 459 | 97% | 306.36 | 1087 / 1118 |
lung | 100% | 2915.19 | 578 / 578 | 93% | 25.33 | 1079 / 1155 |
kidney | 100% | 2744.62 | 89 / 89 | 91% | 27.73 | 819 / 901 |
pancreas | 95% | 1035.23 | 310 / 328 | 93% | 24.72 | 166 / 178 |
esophagus | 100% | 1362.56 | 1443 / 1445 | 87% | 20.01 | 160 / 183 |
brain | 95% | 3323.38 | 2503 / 2642 | 92% | 20.81 | 649 / 705 |
adrenal gland | 98% | 1129.29 | 253 / 258 | 88% | 37.83 | 203 / 230 |
thymus | 100% | 1393.36 | 651 / 653 | 84% | 17.65 | 506 / 605 |
bladder | 100% | 2267.43 | 21 / 21 | 82% | 22.09 | 411 / 504 |
uterus | 100% | 1395.74 | 170 / 170 | 81% | 17.82 | 372 / 459 |
ovary | 100% | 2456.06 | 180 / 180 | 76% | 12.80 | 325 / 430 |
stomach | 100% | 1804.59 | 358 / 359 | 62% | 11.14 | 178 / 286 |
skin | 85% | 1406.83 | 1540 / 1809 | 68% | 15.14 | 323 / 472 |
liver | 85% | 762.89 | 191 / 226 | 64% | 12.60 | 259 / 406 |
intestine | 97% | 1564.66 | 937 / 966 | 46% | 8.06 | 241 / 527 |
adipose | 100% | 3580.35 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 4891.30 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.95 | 1 / 1 |
heart | 98% | 1199.02 | 845 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 1445.86 | 1308 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 25.96 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 72% | 18.34 | 21 / 29 |
peripheral blood | 43% | 475.29 | 404 / 929 | 0% | 0 | 0 / 0 |
muscle | 15% | 82.55 | 120 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 11% | 1.51 | 9 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005096 | Molecular function | GTPase activator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TBC1D9 |
Protein name | TBC1 domain family member 9 (TBC1 domain family member 9A) |
Synonyms | TBC1D9A KIAA0882 |
Description | FUNCTION: May act as a GTPase-activating protein for Rab family protein(s). |
Accessions | Q6ZT07 ENST00000442267.3 |