Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 26% ± 10% | |
macrophage | 18 studies | 31% ± 18% | |
microglial cell | 11 studies | 50% ± 20% | |
monocyte | 10 studies | 27% ± 9% | |
myeloid cell | 9 studies | 35% ± 10% | |
fibroblast | 8 studies | 20% ± 4% | |
ciliated cell | 7 studies | 23% ± 7% | |
type I pneumocyte | 7 studies | 24% ± 7% | |
smooth muscle cell | 7 studies | 20% ± 3% | |
pericyte | 6 studies | 21% ± 5% | |
epithelial cell | 6 studies | 27% ± 8% | |
dendritic cell | 6 studies | 32% ± 8% | |
type II pneumocyte | 6 studies | 23% ± 5% | |
basal cell | 6 studies | 22% ± 3% | |
vein endothelial cell | 5 studies | 31% ± 21% | |
capillary endothelial cell | 5 studies | 23% ± 6% | |
squamous epithelial cell | 4 studies | 36% ± 21% | |
non-classical monocyte | 4 studies | 26% ± 8% | |
glutamatergic neuron | 4 studies | 42% ± 13% | |
classical monocyte | 4 studies | 22% ± 7% | |
B cell | 4 studies | 18% ± 4% | |
lymphocyte | 4 studies | 27% ± 11% | |
T cell | 4 studies | 22% ± 5% | |
endothelial cell of vascular tree | 4 studies | 33% ± 18% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 7% | |
club cell | 4 studies | 24% ± 7% | |
natural killer cell | 4 studies | 18% ± 3% | |
oligodendrocyte | 4 studies | 21% ± 5% | |
conventional dendritic cell | 3 studies | 21% ± 4% | |
mesothelial cell | 3 studies | 20% ± 1% | |
mononuclear phagocyte | 3 studies | 27% ± 4% | |
tissue-resident macrophage | 3 studies | 24% ± 9% | |
retinal rod cell | 3 studies | 25% ± 5% | |
GABAergic neuron | 3 studies | 35% ± 9% | |
alveolar macrophage | 3 studies | 32% ± 11% | |
endothelial cell of lymphatic vessel | 3 studies | 23% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 20% ± 3% | |
granule cell | 3 studies | 32% ± 10% | |
interneuron | 3 studies | 33% ± 15% | |
neuron | 3 studies | 35% ± 16% | |
astrocyte | 3 studies | 27% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 9724.68 | 578 / 578 | 99% | 60.87 | 1148 / 1155 |
esophagus | 100% | 5691.23 | 1444 / 1445 | 99% | 55.50 | 182 / 183 |
breast | 100% | 6250.64 | 459 / 459 | 99% | 74.40 | 1111 / 1118 |
thymus | 100% | 6128.46 | 653 / 653 | 99% | 79.66 | 601 / 605 |
intestine | 100% | 5549.35 | 966 / 966 | 99% | 40.35 | 521 / 527 |
prostate | 100% | 5003.74 | 245 / 245 | 99% | 54.93 | 496 / 502 |
kidney | 100% | 4532.07 | 89 / 89 | 99% | 63.68 | 890 / 901 |
stomach | 100% | 4167.78 | 359 / 359 | 99% | 38.43 | 282 / 286 |
pancreas | 100% | 3111.17 | 328 / 328 | 98% | 68.94 | 174 / 178 |
uterus | 100% | 3519.56 | 170 / 170 | 97% | 46.31 | 444 / 459 |
skin | 100% | 5550.57 | 1804 / 1809 | 96% | 32.05 | 454 / 472 |
ovary | 100% | 3463.80 | 180 / 180 | 96% | 38.86 | 411 / 430 |
adrenal gland | 100% | 4911.07 | 258 / 258 | 95% | 35.08 | 218 / 230 |
bladder | 100% | 4116.33 | 21 / 21 | 93% | 34.07 | 471 / 504 |
brain | 86% | 2969.68 | 2275 / 2642 | 100% | 44.78 | 703 / 705 |
liver | 95% | 1652.40 | 215 / 226 | 62% | 15.29 | 253 / 406 |
adipose | 100% | 5906.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4743.83 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 53.76 | 29 / 29 |
spleen | 100% | 8878.88 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 64.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 21.34 | 1 / 1 |
peripheral blood | 99% | 6814.55 | 916 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 2299.89 | 831 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 1854.36 | 767 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 15.68 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006974 | Biological process | DNA damage response |
GO_0005575 | Cellular component | cellular_component |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | SUSD6 |
Protein name | Sushi domain-containing protein 6 (Drug-activated gene overexpressed protein) |
Synonyms | KIAA0247 DRAGO |
Description | FUNCTION: May play a role in growth-suppressive activity and cell death . May be involved in the production of chemokine molecules in umbilical vein endothelial cells (HUVECs) cultured in THP1 monocyte LPS-induced medium . Plays a role in preventing tumor onset (By similarity). . |
Accessions | ENST00000342745.5 Q92537 |