Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 32% ± 15% | |
mast cell | 20 studies | 28% ± 8% | |
endothelial cell of lymphatic vessel | 14 studies | 32% ± 13% | |
oligodendrocyte | 14 studies | 38% ± 14% | |
astrocyte | 9 studies | 32% ± 17% | |
capillary endothelial cell | 9 studies | 49% ± 15% | |
oligodendrocyte precursor cell | 9 studies | 36% ± 14% | |
fibroblast | 8 studies | 25% ± 12% | |
glutamatergic neuron | 7 studies | 30% ± 13% | |
endothelial cell of artery | 6 studies | 24% ± 10% | |
GABAergic neuron | 6 studies | 41% ± 15% | |
vein endothelial cell | 5 studies | 37% ± 20% | |
cardiac muscle cell | 5 studies | 39% ± 9% | |
goblet cell | 5 studies | 33% ± 21% | |
epithelial cell | 4 studies | 42% ± 27% | |
type I pneumocyte | 4 studies | 28% ± 7% | |
interneuron | 4 studies | 38% ± 16% | |
abnormal cell | 3 studies | 27% ± 8% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 31% ± 4% | |
intestinal crypt stem cell | 3 studies | 23% ± 1% | |
melanocyte | 3 studies | 41% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 2211.70 | 652 / 653 | 92% | 30.12 | 559 / 605 |
intestine | 99% | 1233.99 | 961 / 966 | 84% | 8.07 | 444 / 527 |
prostate | 95% | 1146.02 | 233 / 245 | 87% | 10.64 | 438 / 502 |
skin | 96% | 1277.27 | 1735 / 1809 | 75% | 8.64 | 353 / 472 |
stomach | 94% | 876.06 | 336 / 359 | 76% | 6.49 | 216 / 286 |
pancreas | 100% | 2085.46 | 328 / 328 | 66% | 5.38 | 118 / 178 |
brain | 86% | 2515.61 | 2272 / 2642 | 69% | 6.98 | 488 / 705 |
bladder | 100% | 1508.00 | 21 / 21 | 32% | 3.00 | 159 / 504 |
lung | 99% | 3115.15 | 575 / 578 | 28% | 2.04 | 328 / 1155 |
ovary | 47% | 286.34 | 85 / 180 | 76% | 12.24 | 327 / 430 |
uterus | 85% | 545.55 | 145 / 170 | 26% | 4.04 | 121 / 459 |
esophagus | 76% | 1353.69 | 1093 / 1445 | 30% | 2.56 | 55 / 183 |
heart | 96% | 1170.95 | 829 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 20.06 | 74 / 80 |
adipose | 89% | 802.88 | 1073 / 1204 | 0% | 0 | 0 / 0 |
breast | 83% | 570.63 | 382 / 459 | 4% | 0.32 | 44 / 1118 |
kidney | 21% | 108.01 | 19 / 89 | 34% | 5.58 | 310 / 901 |
liver | 10% | 37.22 | 22 / 226 | 43% | 2.47 | 176 / 406 |
tonsil | 0% | 0 | 0 / 0 | 33% | 2.25 | 15 / 45 |
muscle | 30% | 120.51 | 243 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 3.41 | 5 / 29 |
blood vessel | 17% | 115.49 | 223 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 32.19 | 1 / 258 | 10% | 1.04 | 23 / 230 |
peripheral blood | 0% | 2.93 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0035542 | Biological process | regulation of SNARE complex assembly |
GO_0045920 | Biological process | negative regulation of exocytosis |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0035493 | Biological process | SNARE complex assembly |
GO_0005912 | Cellular component | adherens junction |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0098641 | Molecular function | cadherin binding involved in cell-cell adhesion |
Gene name | STXBP6 |
Protein name | Syntaxin binding protein 6 Syntaxin-binding protein 6 (Amisyn) |
Synonyms | HSPC156 |
Description | FUNCTION: Forms non-fusogenic complexes with SNAP25 and STX1A and may thereby modulate the formation of functional SNARE complexes and exocytosis. |
Accessions | ENST00000546511.5 [Q8NFX7-1] ENST00000396700.5 [Q8NFX7-1] F8VZZ2 ENST00000548369.1 [Q8NFX7-3] ENST00000550887.5 [Q8NFX7-1] ENST00000548182.1 Q8NFX7 ENST00000323944.10 [Q8NFX7-1] ENST00000419632.6 [Q8NFX7-1] |