Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2164.39 | 2642 / 2642 | 100% | 61.78 | 705 / 705 |
ovary | 100% | 1790.55 | 180 / 180 | 100% | 26.53 | 429 / 430 |
prostate | 100% | 2247.18 | 244 / 245 | 100% | 64.79 | 502 / 502 |
breast | 100% | 1742.05 | 459 / 459 | 100% | 25.30 | 1113 / 1118 |
kidney | 100% | 1809.35 | 89 / 89 | 99% | 39.63 | 894 / 901 |
thymus | 100% | 2136.62 | 653 / 653 | 99% | 31.92 | 600 / 605 |
lung | 100% | 2396.67 | 578 / 578 | 98% | 29.58 | 1133 / 1155 |
intestine | 100% | 1565.37 | 966 / 966 | 98% | 24.40 | 516 / 527 |
bladder | 100% | 1622.95 | 21 / 21 | 97% | 23.69 | 489 / 504 |
adrenal gland | 100% | 1252.70 | 258 / 258 | 96% | 32.03 | 221 / 230 |
pancreas | 98% | 715.38 | 320 / 328 | 98% | 23.17 | 175 / 178 |
stomach | 100% | 1067.24 | 359 / 359 | 96% | 21.37 | 274 / 286 |
uterus | 100% | 2043.57 | 170 / 170 | 96% | 24.30 | 439 / 459 |
esophagus | 99% | 1348.85 | 1435 / 1445 | 95% | 17.84 | 173 / 183 |
skin | 89% | 1054.28 | 1618 / 1809 | 98% | 35.92 | 461 / 472 |
liver | 82% | 399.06 | 185 / 226 | 67% | 8.83 | 271 / 406 |
adipose | 100% | 1855.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.79 | 29 / 29 |
spleen | 100% | 1714.09 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1582.77 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1147.74 | 851 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 643.67 | 786 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 19.08 | 75 / 80 |
peripheral blood | 90% | 1401.22 | 835 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 12.53 | 38 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0099044 | Biological process | vesicle tethering to endoplasmic reticulum |
GO_0030301 | Biological process | cholesterol transport |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0140284 | Cellular component | endoplasmic reticulum-endosome membrane contact site |
GO_0005768 | Cellular component | endosome |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0044232 | Cellular component | organelle membrane contact site |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0015485 | Molecular function | cholesterol binding |
GO_0005515 | Molecular function | protein binding |
Gene name | STARD3NL |
Protein name | STARD3 N-terminal like STARD3 N-terminal-like protein (MLN64 N-terminal domain homolog) |
Synonyms | UNQ855/PRO1864 MENTHO |
Description | FUNCTION: Tethering protein that creates contact site between the endoplasmic reticulum and late endosomes: localizes to late endosome membranes and contacts the endoplasmic reticulum via interaction with VAPA and VAPB . . |
Accessions | ENST00000009041.12 [O95772-1] ENST00000429075.1 ENST00000396013.5 [O95772-1] C9JKL2 ENST00000440144.5 O95772 C9JPX5 C9JJ39 ENST00000453225.5 ENST00000434197.5 C9J3F5 |