Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 11 studies | 35% ± 16% | |
glutamatergic neuron | 10 studies | 42% ± 24% | |
endothelial cell | 9 studies | 31% ± 12% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 12% | |
oligodendrocyte | 8 studies | 29% ± 9% | |
GABAergic neuron | 7 studies | 46% ± 24% | |
interneuron | 6 studies | 46% ± 23% | |
microglial cell | 6 studies | 29% ± 8% | |
mast cell | 6 studies | 28% ± 6% | |
neuron | 5 studies | 29% ± 11% | |
smooth muscle cell | 5 studies | 22% ± 6% | |
macrophage | 4 studies | 28% ± 10% | |
retinal cone cell | 4 studies | 65% ± 22% | |
retinal rod cell | 4 studies | 66% ± 17% | |
adipocyte | 4 studies | 26% ± 7% | |
GABAergic interneuron | 3 studies | 33% ± 3% | |
epithelial cell | 3 studies | 24% ± 5% | |
retinal ganglion cell | 3 studies | 33% ± 4% | |
amacrine cell | 3 studies | 23% ± 4% | |
retina horizontal cell | 3 studies | 22% ± 6% | |
ependymal cell | 3 studies | 34% ± 15% | |
fibroblast | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 958.40 | 574 / 578 | 11% | 0.24 | 122 / 1155 |
bladder | 100% | 1696.90 | 21 / 21 | 3% | 0.09 | 16 / 504 |
esophagus | 89% | 1440.64 | 1280 / 1445 | 14% | 0.29 | 26 / 183 |
breast | 100% | 1187.12 | 459 / 459 | 2% | 0.07 | 17 / 1118 |
kidney | 100% | 903.75 | 89 / 89 | 1% | 0.05 | 13 / 901 |
uterus | 99% | 1733.64 | 169 / 170 | 2% | 0.03 | 7 / 459 |
ovary | 100% | 1509.00 | 180 / 180 | 1% | 0.01 | 4 / 430 |
adrenal gland | 100% | 1410.07 | 258 / 258 | 0% | 0.01 | 1 / 230 |
brain | 100% | 1978.69 | 2638 / 2642 | 0% | 0.02 | 3 / 705 |
prostate | 100% | 1445.29 | 244 / 245 | 1% | 0.03 | 3 / 502 |
adipose | 100% | 1321.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 4067.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 821.03 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1657.81 | 1334 / 1335 | 0% | 0 | 0 / 0 |
thymus | 100% | 983.21 | 651 / 653 | 0% | 0 | 0 / 605 |
heart | 99% | 1350.95 | 854 / 861 | 0% | 0 | 0 / 0 |
liver | 98% | 697.29 | 222 / 226 | 0% | 0 | 0 / 406 |
skin | 98% | 772.02 | 1769 / 1809 | 0% | 0 | 0 / 472 |
intestine | 93% | 1303.11 | 895 / 966 | 1% | 0.02 | 6 / 527 |
stomach | 89% | 802.86 | 320 / 359 | 2% | 0.05 | 7 / 286 |
pancreas | 84% | 390.87 | 275 / 328 | 1% | 0.05 | 1 / 178 |
peripheral blood | 44% | 263.41 | 407 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.06 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010706 | Biological process | ganglioside biosynthetic process via lactosylceramide |
GO_0016266 | Biological process | O-glycan processing |
GO_0009312 | Biological process | oligosaccharide biosynthetic process |
GO_0006688 | Biological process | glycosphingolipid biosynthetic process |
GO_0019082 | Biological process | viral protein processing |
GO_0018146 | Biological process | keratan sulfate biosynthetic process |
GO_0006486 | Biological process | protein glycosylation |
GO_0000139 | Cellular component | Golgi membrane |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0008118 | Molecular function | N-acetyllactosaminide alpha-2,3-sialyltransferase activity |
GO_0008373 | Molecular function | sialyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003836 | Molecular function | beta-galactoside (CMP) alpha-2,3-sialyltransferase activity |
Gene name | ST3GAL3 |
Protein name | Alternative protein ST3GAL3 ST3GAL3 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase (EC 2.4.3.6) (Beta-galactoside alpha-2,3-sialyltransferase 3) (Alpha 2,3-ST 3) (Gal beta-1,3(4) GlcNAc alpha-2,3 sialyltransferase) (N-acetyllactosaminide alpha-2,3-sialyltransferase) (ST3Gal III) (ST3GalIII) (ST3N) (Sialyltransferase 6) ST3 beta-galactoside alpha-2,3-sialyltransferase 3 |
Synonyms | SIAT6 |
Description | FUNCTION: Catalyzes the formation of the NeuAc-alpha-2,3-Gal-beta-1,4-GlcNAc-, NeuAc-alpha-2,3-Gal-beta-1,3-GlcNAc- and NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- sequences found in terminal carbohydrate groups of glycoproteins and glycolipids. The highest activity is toward Gal-beta-1,3-GlcNAc and the lowest toward Gal-beta-1,3-GalNAc. . |
Accessions | ENST00000531451.5 [Q11203-18] ENST00000528371.5 [Q11203-17] ENST00000642194.1 ENST00000372374.7 [Q11203-7] A0A2R8Y6U3 ENST00000646032.1 A0A2U3TZH9 ENST00000489897.6 [Q11203-11] ENST00000545417.5 [Q11203-3] ENST00000645161.1 E9PJX2 ENST00000361746.9 ENST00000642949.1 [Q11203-6] A0A2U3TZM2 ENST00000490541.6 [Q11203-25] ENST00000490502.1 ENST00000372372.7 [Q11203-19] ENST00000372368.7 A0A2R8Y4W6 ENST00000643597.1 ENST00000647482.1 ENST00000372369.5 [Q11203-5] A0A2R8Y7J2 ENST00000361812.9 [Q11203-3] ENST00000372365.5 [Q11203-10] ENST00000642780.1 ENST00000645142.1 [Q11203-6] ENST00000643283.1 ENST00000372362.6 [Q11203-12] A0A2R8Y4Y4 Q11203 ENST00000262915.8 [Q11203-4] ENST00000643989.1 A0A2U3U052 ENST00000643813.1 ENST00000530154.5 ENST00000647148.1 ENST00000645165.1 [Q11203-11] A0A2R8YFI8 ENST00000335430.10 [Q11203-23] ENST00000531816.1 [Q11203-22] A0A2R8YH87 A0A2R8Y7B2 ENST00000644287.1 A0A2R8Y717 A0A2R8YF05 ENST00000645705.1 ENST00000330208.6 [Q11203-22] ENST00000642504.1 [Q11203-9] ENST00000332628.11 ENST00000347631.8 [Q11203-1] A0A2R8Y732 A0A2R8YFP6 A0A2R8Y682 A0A2R8Y7Z2 ENST00000647237.1 ENST00000353126.8 [Q11203-8] A0A2R8Y6L4 A0A2U3TZK9 A0A2R8Y6U8 ENST00000469715.6 [Q11203-26] ENST00000643886.1 A0A2R8YCV7 ENST00000647128.1 ENST00000530581.5 [Q11203-20] A0A2R8YDB0 ENST00000644645.1 ENST00000647134.1 A0A2R8YFM5 A0A2R8Y7D5 ENST00000372367.5 [Q11203-24] ENST00000644195.1 [Q11203-1] A0A2R8Y7D8 ENST00000645394.1 A0A2R8Y7H6 ENST00000361392.9 [Q11203-2] ENST00000647503.1 ENST00000642331.1 A0A2R8Y6K5 A0A2R8YDA9 ENST00000484868.2 A0A2R8Y244 ENST00000642934.1 [Q11203-16] H0YEP7 A0A2R8YFA0 E9PNN5 ENST00000479383.6 ENST00000646971.1 [Q11203-1] L8E8A4 A0A2R8Y6H4 ENST00000643252.1 ENST00000645034.1 ENST00000533933.6 ENST00000646109.1 ENST00000533997.6 [Q11203-9] ENST00000351035.8 [Q11203-13] ENST00000646027.1 ENST00000645640.1 [Q11203-11] A0A2R8YE42 ENST00000531993.6 [Q11203-21] ENST00000645117.1 ENST00000361400.9 [Q11203-15] ENST00000646686.1 ENST00000646069.1 ENST00000646096.1 ENST00000533212.5 [Q11203-14] ENST00000461066.6 A0A1B2JLU4 A0A2R8Y847 ENST00000532911.6 ENST00000372366.6 [Q11203-23] E9PJI3 A0A2R8YDJ6 ENST00000644922.1 |