Insufficient scRNA-seq data for expression of SSX1 at single-cell level.
Insufficient scRNA-seq data for expression of SSX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 57% | 16.29 | 375 / 653 | 63% | 13.15 | 380 / 605 |
skin | 1% | 0.15 | 25 / 1809 | 39% | 16.88 | 186 / 472 |
eye | 0% | 0 | 0 / 0 | 38% | 8.50 | 30 / 80 |
liver | 0% | 0.05 | 1 / 226 | 33% | 23.48 | 135 / 406 |
ovary | 1% | 0.14 | 1 / 180 | 8% | 3.24 | 36 / 430 |
esophagus | 0% | 0.08 | 6 / 1445 | 5% | 4.29 | 9 / 183 |
stomach | 0% | 0 | 0 / 359 | 5% | 3.64 | 14 / 286 |
lung | 1% | 0.06 | 3 / 578 | 4% | 1.42 | 50 / 1155 |
breast | 1% | 0.06 | 3 / 459 | 4% | 1.74 | 41 / 1118 |
bladder | 0% | 0 | 0 / 21 | 4% | 2.56 | 21 / 504 |
uterus | 1% | 0.04 | 1 / 170 | 2% | 0.63 | 11 / 459 |
adrenal gland | 0% | 0.17 | 1 / 258 | 2% | 0.08 | 4 / 230 |
intestine | 0% | 0.03 | 4 / 966 | 2% | 0.97 | 9 / 527 |
prostate | 1% | 0.60 | 3 / 245 | 1% | 0.04 | 4 / 502 |
pancreas | 1% | 0.04 | 2 / 328 | 1% | 0.96 | 2 / 178 |
kidney | 0% | 0 | 0 / 89 | 1% | 1.58 | 12 / 901 |
adipose | 1% | 0.46 | 14 / 1204 | 0% | 0 | 0 / 0 |
muscle | 1% | 0.36 | 9 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 0.39 | 10 / 929 | 0% | 0 | 0 / 0 |
brain | 1% | 0.18 | 21 / 2642 | 0% | 0 | 0 / 705 |
heart | 1% | 0.06 | 5 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.04 | 5 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007283 | Biological process | spermatogenesis |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005856 | Cellular component | cytoskeleton |
GO_0036126 | Cellular component | sperm flagellum |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SSX1 |
Protein name | Protein SSX1 (Cancer/testis antigen 5.1) (CT5.1) (Synovial sarcoma, X breakpoint 1) |
Synonyms | |
Description | FUNCTION: Could act as a modulator of transcription . Plays a role in spermatogenesis . . |
Accessions | Q16384 ENST00000376919.4 |