Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 12 studies | 19% ± 4% | |
endothelial cell | 10 studies | 24% ± 7% | |
smooth muscle cell | 9 studies | 21% ± 5% | |
natural killer cell | 8 studies | 20% ± 7% | |
epithelial cell | 7 studies | 28% ± 11% | |
classical monocyte | 5 studies | 23% ± 5% | |
regulatory T cell | 5 studies | 24% ± 14% | |
conventional dendritic cell | 4 studies | 26% ± 6% | |
retinal ganglion cell | 4 studies | 53% ± 28% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 6% | |
ciliated cell | 4 studies | 23% ± 4% | |
CD8-positive, alpha-beta T cell | 4 studies | 18% ± 2% | |
macrophage | 4 studies | 21% ± 4% | |
endothelial cell of vascular tree | 4 studies | 18% ± 2% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
non-classical monocyte | 3 studies | 29% ± 8% | |
B cell | 3 studies | 37% ± 24% | |
GABAergic neuron | 3 studies | 36% ± 12% | |
glutamatergic neuron | 3 studies | 45% ± 9% | |
CD4-positive, alpha-beta T cell | 3 studies | 18% ± 2% | |
dendritic cell | 3 studies | 36% ± 7% | |
hepatocyte | 3 studies | 30% ± 10% | |
astrocyte | 3 studies | 32% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2075.33 | 1445 / 1445 | 100% | 8.91 | 183 / 183 |
kidney | 100% | 2123.17 | 89 / 89 | 100% | 10.86 | 901 / 901 |
lung | 100% | 2057.18 | 578 / 578 | 100% | 11.06 | 1155 / 1155 |
ovary | 100% | 1079.07 | 180 / 180 | 100% | 11.07 | 430 / 430 |
skin | 100% | 1888.27 | 1809 / 1809 | 100% | 13.26 | 472 / 472 |
stomach | 100% | 1477.03 | 359 / 359 | 100% | 10.06 | 286 / 286 |
uterus | 100% | 1497.51 | 170 / 170 | 100% | 13.26 | 459 / 459 |
breast | 100% | 2139.19 | 459 / 459 | 100% | 11.05 | 1117 / 1118 |
intestine | 100% | 1951.65 | 966 / 966 | 100% | 11.58 | 526 / 527 |
bladder | 100% | 1778.43 | 21 / 21 | 100% | 12.07 | 503 / 504 |
brain | 100% | 1679.33 | 2636 / 2642 | 100% | 10.49 | 705 / 705 |
liver | 100% | 2650.61 | 226 / 226 | 100% | 9.56 | 405 / 406 |
thymus | 100% | 1744.51 | 652 / 653 | 100% | 11.83 | 603 / 605 |
prostate | 100% | 1327.77 | 244 / 245 | 100% | 6.98 | 501 / 502 |
pancreas | 98% | 940.73 | 323 / 328 | 99% | 10.42 | 177 / 178 |
adrenal gland | 100% | 3191.10 | 258 / 258 | 97% | 9.40 | 224 / 230 |
adipose | 100% | 2377.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2692.80 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.81 | 29 / 29 |
spleen | 100% | 1974.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.68 | 1 / 1 |
muscle | 100% | 1752.63 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1880.28 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 9.05 | 79 / 80 |
peripheral blood | 97% | 1474.99 | 903 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | SMIM12 |
Protein name | Small integral membrane protein 12 |
Synonyms | C1orf212 |
Description | |
Accessions | Q96EX1 ENST00000423898.1 ENST00000446026.1 ENST00000426886.1 ENST00000456842.1 ENST00000521580.3 ENST00000417239.1 E5RH51 |