Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 7 studies | 29% ± 10% | |
Mueller cell | 6 studies | 43% ± 17% | |
astrocyte | 5 studies | 24% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 25% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2428.35 | 2639 / 2642 | 98% | 21.40 | 692 / 705 |
skin | 72% | 455.67 | 1302 / 1809 | 69% | 5.83 | 327 / 472 |
spleen | 100% | 1911.56 | 241 / 241 | 0% | 0 | 0 / 0 |
kidney | 36% | 163.62 | 32 / 89 | 32% | 1.37 | 284 / 901 |
adipose | 60% | 341.74 | 726 / 1204 | 0% | 0 | 0 / 0 |
lung | 46% | 227.36 | 265 / 578 | 5% | 0.23 | 53 / 1155 |
bladder | 38% | 176.67 | 8 / 21 | 1% | 0.15 | 5 / 504 |
thymus | 27% | 121.86 | 179 / 653 | 9% | 0.41 | 52 / 605 |
prostate | 29% | 141.35 | 70 / 245 | 3% | 0.05 | 15 / 502 |
ovary | 8% | 45.60 | 14 / 180 | 23% | 0.80 | 101 / 430 |
eye | 0% | 0 | 0 / 0 | 30% | 0.93 | 24 / 80 |
esophagus | 26% | 110.66 | 375 / 1445 | 2% | 0.02 | 3 / 183 |
intestine | 25% | 107.09 | 241 / 966 | 1% | 0.02 | 5 / 527 |
uterus | 15% | 60.36 | 25 / 170 | 9% | 0.58 | 42 / 459 |
heart | 21% | 88.86 | 184 / 861 | 0% | 0 | 0 / 0 |
pancreas | 16% | 67.01 | 51 / 328 | 3% | 0.12 | 6 / 178 |
breast | 10% | 32.86 | 44 / 459 | 1% | 0.04 | 15 / 1118 |
adrenal gland | 1% | 4.32 | 3 / 258 | 7% | 0.23 | 17 / 230 |
stomach | 6% | 27.07 | 23 / 359 | 2% | 0.05 | 6 / 286 |
blood vessel | 8% | 44.38 | 109 / 1335 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 0.02 | 3 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007409 | Biological process | axonogenesis |
GO_0050807 | Biological process | regulation of synapse organization |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0030425 | Cellular component | dendrite |
GO_0005515 | Molecular function | protein binding |
Gene name | SLITRK2 |
Protein name | SLIT and NTRK-like protein 2 SLIT and NTRK-like family, member 2, isoform CRA_b (SLIT and NTRK-like protein 2) |
Synonyms | UNQ9197/PRO34756 hCG_1646164 KIAA1854 SLITL1 CXorf2 |
Description | FUNCTION: It is involved in synaptogenesis and promotes excitatory synapse differentiation . Suppresses neurite outgrowth (By similarity). Involved in the negative regulation of NTRK2 . . |
Accessions | Q9H156 B3KTY4 ENST00000335565 ENST00000370490.1 [Q9H156-1] ENST00000335565.6 [Q9H156-1] |