Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| naive B cell | 12 studies | 20% ± 3% | |
| B cell | 11 studies | 22% ± 4% | |
| goblet cell | 7 studies | 27% ± 10% | |
| epithelial cell | 6 studies | 33% ± 16% | |
| plasma cell | 5 studies | 31% ± 10% | |
| endothelial cell | 4 studies | 23% ± 5% | |
| ciliated cell | 4 studies | 29% ± 5% | |
| conventional dendritic cell | 3 studies | 28% ± 9% | |
| non-classical monocyte | 3 studies | 21% ± 2% | |
| basal cell | 3 studies | 35% ± 4% | |
| memory B cell | 3 studies | 16% ± 1% | |
| macrophage | 3 studies | 20% ± 3% | |
| dendritic cell | 3 studies | 23% ± 5% | |
| plasmacytoid dendritic cell | 3 studies | 21% ± 3% | |
| regulatory T cell | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 100% | 910.88 | 180 / 180 | 100% | 106.57 | 430 / 430 |
| thymus | 100% | 1829.31 | 653 / 653 | 100% | 79.40 | 604 / 605 |
| skin | 100% | 1805.46 | 1809 / 1809 | 100% | 67.65 | 471 / 472 |
| breast | 100% | 1552.46 | 459 / 459 | 100% | 157.17 | 1115 / 1118 |
| prostate | 100% | 1858.82 | 245 / 245 | 100% | 105.48 | 500 / 502 |
| uterus | 100% | 1130.82 | 170 / 170 | 100% | 95.82 | 457 / 459 |
| liver | 100% | 1706.17 | 226 / 226 | 100% | 102.23 | 404 / 406 |
| pancreas | 100% | 2037.13 | 328 / 328 | 99% | 90.45 | 177 / 178 |
| bladder | 100% | 1318.71 | 21 / 21 | 99% | 107.71 | 499 / 504 |
| lung | 100% | 1903.66 | 577 / 578 | 99% | 121.06 | 1145 / 1155 |
| intestine | 100% | 1914.58 | 966 / 966 | 99% | 74.30 | 521 / 527 |
| kidney | 100% | 1870.02 | 89 / 89 | 99% | 46.57 | 889 / 901 |
| stomach | 100% | 1773.95 | 359 / 359 | 98% | 62.72 | 281 / 286 |
| esophagus | 100% | 1319.02 | 1445 / 1445 | 98% | 46.68 | 179 / 183 |
| adrenal gland | 100% | 2664.46 | 258 / 258 | 67% | 32.91 | 153 / 230 |
| brain | 91% | 440.14 | 2397 / 2642 | 47% | 12.54 | 331 / 705 |
| adipose | 100% | 1518.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 76.90 | 29 / 29 |
| spleen | 100% | 2447.60 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 63.26 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 78.51 | 1 / 1 |
| blood vessel | 99% | 993.24 | 1327 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 99% | 1417.22 | 916 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 98% | 45.21 | 78 / 80 |
| heart | 94% | 559.48 | 812 / 861 | 0% | 0 | 0 / 0 |
| muscle | 47% | 179.64 | 376 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0042946 | Biological process | glucoside transport |
| GO_0008643 | Biological process | carbohydrate transport |
| GO_0008645 | Biological process | hexose transmembrane transport |
| GO_0000139 | Cellular component | Golgi membrane |
| GO_0012505 | Cellular component | endomembrane system |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016020 | Cellular component | membrane |
| GO_0042947 | Molecular function | glucoside transmembrane transporter activity |
| GO_0051119 | Molecular function | sugar transmembrane transporter activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SLC50A1 |
| Protein name | Solute carrier family 50 member 1 Sugar transporter SWEET1 (Solute carrier family 50 member 1) Sugar transporter SWEET1 (HsSWEET1) (RAG1-activating protein 1) (Solute carrier family 50 member 1) (Stromal cell protein) |
| Synonyms | RAG1AP1 SCP |
| Description | FUNCTION: Mediates sugar transport across membranes. May stimulate V(D)J recombination by the activation of RAG1. . |
| Accessions | ENST00000488609.5 ENST00000622581.4 A0A3B3ITH1 ENST00000368404.9 [Q9BRV3-1] ENST00000484157.5 ENST00000650403.1 ENST00000368401.6 [Q9BRV3-2] ENST00000303343.12 [Q9BRV3-3] Q9BRV3 Q5SR67 ENST00000475824.6 A0A3B3IT24 ENST00000368405.7 A0A3B3IS38 ENST00000490276.5 A0A3B3ISS5 A0A087WXX5 |