Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 52% ± 25% | |
endothelial cell | 14 studies | 25% ± 7% | |
oligodendrocyte | 12 studies | 55% ± 18% | |
mast cell | 12 studies | 51% ± 18% | |
macrophage | 11 studies | 40% ± 13% | |
microglial cell | 9 studies | 43% ± 14% | |
adipocyte | 9 studies | 47% ± 13% | |
fibroblast | 9 studies | 24% ± 7% | |
glutamatergic neuron | 7 studies | 35% ± 17% | |
pericyte | 7 studies | 30% ± 15% | |
smooth muscle cell | 7 studies | 29% ± 9% | |
myeloid cell | 7 studies | 36% ± 20% | |
GABAergic neuron | 6 studies | 29% ± 15% | |
neuron | 6 studies | 36% ± 24% | |
goblet cell | 6 studies | 42% ± 27% | |
epithelial cell | 6 studies | 30% ± 16% | |
basal cell | 6 studies | 40% ± 18% | |
dendritic cell | 5 studies | 30% ± 6% | |
T cell | 5 studies | 21% ± 3% | |
monocyte | 5 studies | 47% ± 6% | |
type I pneumocyte | 5 studies | 21% ± 3% | |
type II pneumocyte | 5 studies | 23% ± 4% | |
ciliated cell | 4 studies | 25% ± 7% | |
club cell | 4 studies | 29% ± 6% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 6% | |
natural killer cell | 4 studies | 21% ± 2% | |
glial cell | 3 studies | 27% ± 15% | |
granule cell | 3 studies | 25% ± 7% | |
plasma cell | 3 studies | 38% ± 10% | |
hepatocyte | 3 studies | 52% ± 19% | |
B cell | 3 studies | 26% ± 5% | |
alveolar macrophage | 3 studies | 57% ± 9% | |
respiratory goblet cell | 3 studies | 35% ± 11% | |
lymphocyte | 3 studies | 33% ± 7% | |
mesothelial cell | 3 studies | 27% ± 0% | |
interneuron | 3 studies | 34% ± 14% | |
mucus secreting cell | 3 studies | 37% ± 14% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1446.96 | 459 / 459 | 100% | 67.12 | 1117 / 1118 |
bladder | 100% | 727.57 | 21 / 21 | 100% | 34.22 | 502 / 504 |
pancreas | 100% | 1032.06 | 328 / 328 | 99% | 34.84 | 177 / 178 |
liver | 100% | 1596.83 | 226 / 226 | 99% | 27.18 | 400 / 406 |
lung | 99% | 871.46 | 573 / 578 | 99% | 37.00 | 1147 / 1155 |
stomach | 99% | 1233.83 | 357 / 359 | 99% | 28.39 | 282 / 286 |
intestine | 98% | 912.20 | 950 / 966 | 99% | 32.69 | 523 / 527 |
brain | 99% | 752.62 | 2603 / 2642 | 98% | 18.95 | 693 / 705 |
uterus | 98% | 487.81 | 167 / 170 | 97% | 25.92 | 447 / 459 |
kidney | 100% | 884.15 | 89 / 89 | 95% | 17.86 | 860 / 901 |
skin | 100% | 1261.90 | 1809 / 1809 | 95% | 22.05 | 450 / 472 |
thymus | 100% | 2172.94 | 653 / 653 | 95% | 26.13 | 576 / 605 |
prostate | 100% | 741.82 | 244 / 245 | 95% | 16.09 | 478 / 502 |
esophagus | 97% | 906.43 | 1404 / 1445 | 97% | 18.71 | 178 / 183 |
ovary | 73% | 243.24 | 131 / 180 | 92% | 14.57 | 396 / 430 |
adrenal gland | 100% | 836.13 | 257 / 258 | 56% | 6.19 | 129 / 230 |
adipose | 100% | 1141.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 24.43 | 29 / 29 |
spleen | 100% | 783.73 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.12 | 1 / 1 |
blood vessel | 100% | 833.26 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 588.51 | 840 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 10.57 | 64 / 80 |
heart | 75% | 254.83 | 644 / 861 | 0% | 0 | 0 / 0 |
muscle | 65% | 197.98 | 518 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071578 | Biological process | zinc ion import across plasma membrane |
GO_0071577 | Biological process | zinc ion transmembrane transport |
GO_0035434 | Biological process | copper ion transmembrane transport |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005385 | Molecular function | zinc ion transmembrane transporter activity |
GO_0005375 | Molecular function | copper ion transmembrane transporter activity |
Gene name | SLC39A11 |
Protein name | Zinc transporter ZIP11 Zinc transporter ZIP11 (Solute carrier family 39 member 11) (Zrt- and Irt-like protein 11) Solute carrier family 39 member 11 Zinc transporter ZIP11 (Solute carrier family 39 member 11) (Zrt- and Irt-like protein 11) (ZIP-11) |
Synonyms | C17orf26 ZIP11 |
Description | FUNCTION: Zinc importer that regulates cytosolic zinc concentrations either via zinc influx from the extracellular compartment or efflux from intracellular organelles such as Golgi apparatus. May transport copper ions as well. The transport mechanism remains to be elucidated. . |
Accessions | ENST00000578620.1 ENST00000582769.5 ENST00000584129.1 ENST00000579319.1 J3KRX2 ENST00000633986.1 J3QLB2 J3KTP1 A0A0J9YWF0 ENST00000583146.5 ENST00000255559.8 [Q8N1S5-2] J3QQP1 ENST00000632654.1 ENST00000632745.1 ENST00000632080.1 ENST00000632060.1 ENST00000542342.6 [Q8N1S5-1] ENST00000580557.5 J3KT59 ENST00000633145.1 J3QS49 J3KRI1 ENST00000583715.5 ENST00000579732.5 A0A0J9YXE3 ENST00000579018.5 ENST00000581581.1 J3KS66 Q8N1S5 A0A0J9YXZ0 ENST00000632138.1 A0A0J9YXX3 ENST00000633890.1 J3QRN3 J3QLA9 |