SLC39A1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	27 studies	24% ± 10%	Explore
endothelial cell	17 studies	27% ± 12%	Explore
pericyte	12 studies	23% ± 6%	Explore
endothelial cell of lymphatic vessel	10 studies	27% ± 9%	Explore
capillary endothelial cell	10 studies	21% ± 3%	Explore
vein endothelial cell	8 studies	20% ± 3%	Explore
myofibroblast cell	8 studies	20% ± 4%	Explore
endothelial cell of vascular tree	8 studies	23% ± 4%	Explore
connective tissue cell	7 studies	27% ± 10%	Explore
basal cell	7 studies	25% ± 11%	Explore
epithelial cell	6 studies	37% ± 16%	Explore
macrophage	6 studies	21% ± 4%	Explore
endothelial cell of artery	5 studies	21% ± 5%	Explore
abnormal cell	5 studies	28% ± 12%	Explore
smooth muscle cell	5 studies	26% ± 7%	Explore
conventional dendritic cell	4 studies	26% ± 5%	Explore
non-classical monocyte	4 studies	27% ± 7%	Explore
type I pneumocyte	4 studies	25% ± 7%	Explore
pancreatic A cell	3 studies	41% ± 16%	Explore
classical monocyte	3 studies	20% ± 4%	Explore
placental villous trophoblast	3 studies	38% ± 28%	Explore
myeloid cell	3 studies	25% ± 8%	Explore
ciliated cell	3 studies	26% ± 4%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	22% ± 4%	Explore
dendritic cell	3 studies	27% ± 5%	Explore
pancreatic ductal cell	3 studies	51% ± 17%	Explore
goblet cell	3 studies	18% ± 3%	Explore
plasmacytoid dendritic cell	3 studies	23% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	6 studies	26% ± 8%	Explore
intestine	4 studies	20% ± 9%	Explore
pancreas	3 studies	37% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	5086.83	180 / 180	61%	1.06	264 / 430
prostate	100%	5799.20	245 / 245	61%	0.92	304 / 502
breast	100%	6349.32	459 / 459	54%	0.97	601 / 1118
skin	100%	6290.27	1809 / 1809	36%	0.62	168 / 472
uterus	100%	5774.35	170 / 170	29%	0.44	134 / 459
stomach	100%	4553.51	359 / 359	29%	0.47	83 / 286
lung	100%	8703.12	578 / 578	28%	0.43	319 / 1155
pancreas	97%	2698.09	319 / 328	28%	0.36	50 / 178
brain	96%	1833.61	2541 / 2642	28%	0.40	200 / 705
bladder	100%	5682.10	21 / 21	22%	0.31	110 / 504
intestine	100%	5009.57	966 / 966	22%	0.31	115 / 527
liver	100%	3939.79	225 / 226	18%	0.40	74 / 406
kidney	100%	6438.78	89 / 89	15%	0.26	139 / 901
esophagus	100%	4862.74	1445 / 1445	15%	0.27	27 / 183
thymus	100%	5935.91	653 / 653	5%	0.07	32 / 605
adrenal gland	100%	6938.43	258 / 258	4%	0.09	10 / 230
adipose	100%	6487.21	1204 / 1204	0%	0	0 / 0
blood vessel	100%	6108.67	1335 / 1335	0%	0	0 / 0
spleen	100%	5399.45	241 / 241	0%	0	0 / 0
heart	100%	3865.18	857 / 861	0%	0	0 / 0
muscle	99%	2510.61	794 / 803	0%	0	0 / 0
peripheral blood	88%	4041.48	814 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	31%	0.50	9 / 29
tonsil	0%	0	0 / 0	16%	0.20	7 / 45
eye	0%	0	0 / 0	8%	0.11	6 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1