Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 49% ± 17% | |
endothelial cell | 14 studies | 36% ± 19% | |
astrocyte | 12 studies | 33% ± 13% | |
microglial cell | 12 studies | 30% ± 12% | |
ciliated cell | 11 studies | 33% ± 17% | |
glutamatergic neuron | 10 studies | 37% ± 20% | |
oligodendrocyte precursor cell | 9 studies | 29% ± 11% | |
adipocyte | 8 studies | 24% ± 11% | |
macrophage | 7 studies | 38% ± 10% | |
endothelial cell of lymphatic vessel | 7 studies | 58% ± 12% | |
GABAergic neuron | 7 studies | 44% ± 15% | |
interneuron | 6 studies | 40% ± 22% | |
epithelial cell | 5 studies | 27% ± 17% | |
goblet cell | 5 studies | 42% ± 27% | |
basal cell | 5 studies | 48% ± 25% | |
type I pneumocyte | 5 studies | 31% ± 9% | |
type II pneumocyte | 5 studies | 35% ± 7% | |
neuron | 4 studies | 35% ± 22% | |
pericyte | 4 studies | 30% ± 18% | |
club cell | 4 studies | 28% ± 7% | |
smooth muscle cell | 3 studies | 39% ± 11% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 48% ± 5% | |
GABAergic interneuron | 3 studies | 29% ± 9% | |
glial cell | 3 studies | 33% ± 2% | |
granule cell | 3 studies | 23% ± 4% | |
Mueller cell | 3 studies | 20% ± 2% | |
hepatocyte | 3 studies | 42% ± 12% | |
fibroblast | 3 studies | 26% ± 6% | |
respiratory goblet cell | 3 studies | 39% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 3997.51 | 243 / 245 | 100% | 32.57 | 501 / 502 |
esophagus | 100% | 2229.94 | 1444 / 1445 | 99% | 26.17 | 181 / 183 |
brain | 100% | 2335.35 | 2637 / 2642 | 99% | 14.76 | 696 / 705 |
intestine | 100% | 2701.76 | 964 / 966 | 97% | 13.10 | 513 / 527 |
stomach | 99% | 2198.67 | 354 / 359 | 98% | 13.59 | 280 / 286 |
lung | 99% | 1809.15 | 575 / 578 | 96% | 18.56 | 1106 / 1155 |
pancreas | 100% | 1791.75 | 328 / 328 | 93% | 8.82 | 165 / 178 |
liver | 100% | 1953.01 | 226 / 226 | 92% | 10.27 | 374 / 406 |
breast | 100% | 1942.62 | 459 / 459 | 91% | 11.44 | 1018 / 1118 |
bladder | 100% | 925.19 | 21 / 21 | 91% | 11.19 | 457 / 504 |
uterus | 97% | 1245.69 | 165 / 170 | 89% | 12.16 | 409 / 459 |
ovary | 97% | 825.76 | 174 / 180 | 78% | 7.55 | 336 / 430 |
kidney | 100% | 1421.94 | 89 / 89 | 59% | 4.35 | 536 / 901 |
skin | 93% | 2560.13 | 1679 / 1809 | 52% | 3.86 | 244 / 472 |
thymus | 100% | 1274.36 | 651 / 653 | 37% | 3.98 | 224 / 605 |
adrenal gland | 96% | 684.76 | 248 / 258 | 27% | 1.64 | 61 / 230 |
spleen | 100% | 1324.53 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.43 | 1 / 1 |
adipose | 100% | 1398.62 | 1200 / 1204 | 0% | 0 | 0 / 0 |
muscle | 97% | 1068.91 | 782 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 18.57 | 43 / 45 |
heart | 61% | 336.75 | 529 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 51% | 325.44 | 680 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 1.79 | 12 / 29 |
peripheral blood | 20% | 108.57 | 183 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 16% | 0.71 | 13 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0055085 | Biological process | transmembrane transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0022857 | Molecular function | transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC22A23 |
Protein name | Solute carrier family 22 member 23 SLC22A23 protein (cDNA: FLJ21380 fis, clone COL03329) (cDNA: FLJ22174 fis, clone HRC00767) |
Synonyms | C6orf85 |
Description | |
Accessions | ENST00000467177.5 H7C4T9 ENST00000380298.2 [A1A5C7-4] C9IZW5 C9J4Z0 ENST00000436008.6 F8WBC7 ENST00000485307.5 ENST00000406686.8 [A1A5C7-1] Q7L9D0 ENST00000490273.5 [A1A5C7-2] ENST00000497691.5 ENST00000380302.8 [A1A5C7-2] A1A5C7 |