Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 10 studies | 29% ± 17% | |
endothelial cell | 10 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 8 studies | 27% ± 10% | |
microglial cell | 7 studies | 24% ± 6% | |
oligodendrocyte | 7 studies | 27% ± 12% | |
macrophage | 6 studies | 25% ± 4% | |
mast cell | 6 studies | 23% ± 4% | |
interneuron | 4 studies | 36% ± 19% | |
GABAergic neuron | 4 studies | 41% ± 14% | |
glutamatergic neuron | 4 studies | 43% ± 16% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 3% | |
fibroblast | 4 studies | 20% ± 2% | |
adipocyte | 4 studies | 19% ± 2% | |
neuron | 3 studies | 27% ± 10% | |
plasma cell | 3 studies | 23% ± 4% | |
hepatocyte | 3 studies | 35% ± 19% | |
ciliated cell | 3 studies | 23% ± 6% | |
club cell | 3 studies | 22% ± 6% | |
goblet cell | 3 studies | 36% ± 27% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 40% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 510.59 | 1445 / 1445 | 100% | 7.61 | 183 / 183 |
lung | 100% | 683.35 | 578 / 578 | 100% | 6.14 | 1155 / 1155 |
prostate | 100% | 570.33 | 245 / 245 | 100% | 15.22 | 500 / 502 |
ovary | 100% | 588.74 | 180 / 180 | 100% | 4.04 | 428 / 430 |
breast | 100% | 678.77 | 459 / 459 | 99% | 6.24 | 1112 / 1118 |
bladder | 100% | 492.00 | 21 / 21 | 99% | 5.31 | 501 / 504 |
intestine | 100% | 507.70 | 966 / 966 | 99% | 6.27 | 523 / 527 |
stomach | 100% | 503.11 | 359 / 359 | 99% | 6.38 | 283 / 286 |
thymus | 100% | 708.91 | 653 / 653 | 99% | 4.06 | 596 / 605 |
uterus | 100% | 617.24 | 170 / 170 | 98% | 5.19 | 452 / 459 |
pancreas | 100% | 516.02 | 328 / 328 | 98% | 5.08 | 175 / 178 |
brain | 98% | 243.76 | 2591 / 2642 | 100% | 4.65 | 703 / 705 |
kidney | 100% | 370.16 | 89 / 89 | 97% | 4.24 | 872 / 901 |
adrenal gland | 100% | 559.43 | 258 / 258 | 96% | 3.33 | 220 / 230 |
skin | 100% | 592.00 | 1809 / 1809 | 94% | 3.96 | 445 / 472 |
liver | 100% | 569.70 | 226 / 226 | 93% | 2.96 | 377 / 406 |
adipose | 100% | 654.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 481.84 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 583.10 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.88 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 5.35 | 44 / 45 |
heart | 98% | 253.01 | 841 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 181.04 | 762 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 3.61 | 27 / 29 |
peripheral blood | 82% | 410.97 | 766 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 70% | 1.58 | 56 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0015721 | Biological process | bile acid and bile salt transport |
GO_0060348 | Biological process | bone development |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0006814 | Biological process | sodium ion transport |
GO_0034436 | Biological process | glycoprotein transport |
GO_0048193 | Biological process | Golgi vesicle transport |
GO_0055085 | Biological process | transmembrane transport |
GO_0030210 | Biological process | heparin biosynthetic process |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005797 | Cellular component | Golgi medial cisterna |
GO_0015293 | Molecular function | symporter activity |
GO_0015125 | Molecular function | bile acid transmembrane transporter activity |
Gene name | SLC10A7 |
Protein name | Sodium/bile acid cotransporter 7 (Na(+)/bile acid cotransporter 7) (Solute carrier family 10 member 7) Sodium/bile acid cotransporter |
Synonyms | PSEC0051 P7 C4orf13 |
Description | FUNCTION: Involved in teeth and skeletal development. Has an essential role in the biosynthesis and trafficking of glycosaminoglycans and glycoproteins, to produce a proper functioning extracellular matrix. Required for extracellular matrix mineralization . Also involved in the regulation of cellular calcium homeostasis . Does not show transport activity towards bile acids or steroid sulfates (including taurocholate, cholate, chenodeoxycholate, estrone-3-sulfate, dehydroepiandrosterone sulfate (DHEAS) and pregnenolone sulfate). . FUNCTION: Does not show transport activity towards bile acids or steroid sulfates. . |
Accessions | ENST00000394059.8 [Q0GE19-5] ENST00000511374.5 [Q0GE19-7] A0A8I5QJB5 ENST00000335472.12 [Q0GE19-2] Q0GE19 ENST00000432059.6 [Q0GE19-3] ENST00000693222.1 ENST00000502607.1 [Q0GE19-6] ENST00000507030.5 [Q0GE19-1] |