Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 33 studies | 32% ± 14% | |
plasmacytoid dendritic cell | 20 studies | 45% ± 15% | |
plasma cell | 18 studies | 48% ± 18% | |
memory B cell | 17 studies | 30% ± 9% | |
naive B cell | 14 studies | 23% ± 8% | |
oligodendrocyte precursor cell | 12 studies | 34% ± 16% | |
goblet cell | 8 studies | 36% ± 19% | |
endothelial cell | 7 studies | 22% ± 9% | |
type II pneumocyte | 7 studies | 29% ± 10% | |
astrocyte | 7 studies | 31% ± 10% | |
plasmablast | 6 studies | 53% ± 15% | |
respiratory goblet cell | 6 studies | 41% ± 16% | |
IgA plasma cell | 6 studies | 41% ± 12% | |
IgG plasma cell | 6 studies | 41% ± 7% | |
epithelial cell | 6 studies | 29% ± 11% | |
GABAergic neuron | 5 studies | 25% ± 8% | |
glutamatergic neuron | 5 studies | 34% ± 10% | |
Mueller cell | 5 studies | 38% ± 15% | |
type I pneumocyte | 5 studies | 25% ± 5% | |
dendritic cell | 5 studies | 34% ± 15% | |
club cell | 5 studies | 41% ± 17% | |
secretory cell | 4 studies | 20% ± 5% | |
retinal rod cell | 4 studies | 23% ± 7% | |
T cell | 4 studies | 22% ± 3% | |
ciliated cell | 4 studies | 17% ± 1% | |
conventional dendritic cell | 3 studies | 25% ± 7% | |
retinal pigment epithelial cell | 3 studies | 29% ± 5% | |
CD4-positive, alpha-beta T cell | 3 studies | 20% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 20% ± 2% | |
germinal center B cell | 3 studies | 43% ± 10% | |
lymphocyte | 3 studies | 34% ± 12% | |
basal cell | 3 studies | 24% ± 2% | |
abnormal cell | 3 studies | 25% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 4087.08 | 576 / 578 | 99% | 78.36 | 1142 / 1155 |
pancreas | 100% | 4204.11 | 328 / 328 | 94% | 78.51 | 168 / 178 |
thymus | 99% | 2144.53 | 649 / 653 | 88% | 58.78 | 533 / 605 |
stomach | 87% | 5479.67 | 311 / 359 | 100% | 91.24 | 286 / 286 |
prostate | 89% | 1282.82 | 217 / 245 | 95% | 40.91 | 476 / 502 |
intestine | 76% | 4282.63 | 733 / 966 | 99% | 92.76 | 524 / 527 |
kidney | 85% | 1658.36 | 76 / 89 | 89% | 66.80 | 800 / 901 |
bladder | 90% | 2754.19 | 19 / 21 | 84% | 45.97 | 421 / 504 |
ovary | 56% | 594.68 | 100 / 180 | 95% | 37.72 | 408 / 430 |
esophagus | 49% | 539.63 | 715 / 1445 | 93% | 64.46 | 171 / 183 |
breast | 86% | 995.78 | 394 / 459 | 54% | 14.71 | 606 / 1118 |
brain | 81% | 2575.06 | 2148 / 2642 | 32% | 11.26 | 224 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 113.42 | 29 / 29 |
spleen | 100% | 11210.44 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 4282.41 | 891 / 929 | 0% | 0 | 0 / 0 |
uterus | 18% | 219.65 | 31 / 170 | 76% | 34.22 | 348 / 459 |
adipose | 92% | 1416.00 | 1103 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 35.71 | 40 / 45 |
skin | 34% | 352.26 | 609 / 1809 | 53% | 20.30 | 248 / 472 |
liver | 42% | 442.32 | 96 / 226 | 40% | 23.50 | 161 / 406 |
adrenal gland | 57% | 761.09 | 148 / 258 | 24% | 5.91 | 55 / 230 |
blood vessel | 30% | 317.39 | 402 / 1335 | 0% | 0 | 0 / 0 |
heart | 20% | 180.57 | 174 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 19% | 3.78 | 15 / 80 |
muscle | 1% | 7.54 | 9 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
Gene name | SEL1L3 |
Protein name | SEL1L family member 3 Protein sel-1 homolog 3 (Suppressor of lin-12-like protein 3) (Sel-1L3) |
Synonyms | KIAA0746 |
Description | |
Accessions | Q68CR1 H0Y8P8 H0Y9M6 ENST00000502949.5 [Q68CR1-3] D6RCE1 ENST00000513691.1 ENST00000264868.9 [Q68CR1-2] ENST00000510880.1 ENST00000507618.1 D6RF11 D6RDH1 H0YA36 ENST00000514321.1 ENST00000399878.8 [Q68CR1-1] ENST00000510448.5 ENST00000514872.1 |