SCUBE1 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SCUBE1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	2331.91	257 / 258	62%	12.71	142 / 230
esophagus	84%	8582.42	1209 / 1445	38%	1.80	69 / 183
lung	98%	2774.64	568 / 578	22%	0.79	259 / 1155
ovary	97%	10473.06	175 / 180	19%	0.74	81 / 430
kidney	92%	1105.79	82 / 89	22%	1.08	202 / 901
liver	61%	980.39	138 / 226	45%	4.26	182 / 406
stomach	61%	2294.18	218 / 359	39%	1.13	112 / 286
spleen	99%	2557.81	239 / 241	0%	0	0 / 0
intestine	64%	939.75	623 / 966	31%	0.67	163 / 527
breast	34%	301.59	157 / 459	47%	3.45	527 / 1118
bladder	62%	1100.24	13 / 21	14%	0.36	73 / 504
thymus	33%	266.09	218 / 653	38%	2.63	232 / 605
blood vessel	55%	1226.49	738 / 1335	0%	0	0 / 0
prostate	36%	683.68	87 / 245	12%	0.25	62 / 502
eye	0%	0	0 / 0	35%	0.96	28 / 80
uterus	11%	152.19	19 / 170	15%	0.85	70 / 459
adipose	24%	327.66	283 / 1204	0%	0	0 / 0
skin	3%	22.92	59 / 1809	8%	0.68	40 / 472
tonsil	0%	0	0 / 0	11%	0.20	5 / 45
pancreas	0%	0	0 / 328	8%	0.22	15 / 178
brain	4%	62.68	116 / 2642	4%	0.20	28 / 705
muscle	5%	35.24	39 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.11	1 / 29
heart	0%	0.55	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0045880	Biological process	positive regulation of smoothened signaling pathway
GO_0007165	Biological process	signal transduction
GO_0006954	Biological process	inflammatory response
GO_0007512	Biological process	adult heart development
GO_0009791	Biological process	post-embryonic development
GO_0007596	Biological process	blood coagulation
GO_0045446	Biological process	endothelial cell differentiation
GO_0005615	Cellular component	extracellular space
GO_0009986	Cellular component	cell surface
GO_0009897	Cellular component	external side of plasma membrane
GO_0005886	Cellular component	plasma membrane
GO_0005509	Molecular function	calcium ion binding
GO_0042802	Molecular function	identical protein binding
GO_0005515	Molecular function	protein binding

Gene name	SCUBE1
Protein name	Signal peptide, CUB domain and EGF like domain containing 1 SCUBE1 protein Signal peptide, CUB and EGF-like domain-containing protein 1
Synonyms
Description	FUNCTION: Could function as an adhesive molecule and its matrix bound and soluble fragments may play a critical role in vascular biology. .
Accessions	Q86TI6 ENST00000290460.7 B1AH90 H0Y4Y9 ENST00000360835.9 ENST00000449304.5 Q8IWY4 A0JP65

SCUBE1 report