SCNM1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
conventional dendritic cell	15 studies	27% ± 14%	Explore
classical monocyte	11 studies	28% ± 9%	Explore
natural killer cell	10 studies	20% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	20% ± 2%	Explore
macrophage	8 studies	24% ± 8%	Explore
plasmacytoid dendritic cell	8 studies	27% ± 6%	Explore
non-classical monocyte	7 studies	26% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	19% ± 2%	Explore
monocyte	7 studies	18% ± 3%	Explore
dendritic cell	7 studies	38% ± 16%	Explore
regulatory T cell	5 studies	18% ± 2%	Explore
CD4-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	17% ± 2%	Explore
mature NK T cell	4 studies	16% ± 1%	Explore
CD8-positive, alpha-beta T cell	4 studies	21% ± 3%	Explore
epithelial cell	4 studies	28% ± 8%	Explore
hematopoietic precursor cell	3 studies	25% ± 5%	Explore
myeloid cell	3 studies	27% ± 5%	Explore
ciliated cell	3 studies	22% ± 5%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	16% ± 1%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
B cell	3 studies	21% ± 5%	Explore
double negative thymocyte	3 studies	22% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	8 studies	21% ± 5%	Explore
lung	5 studies	17% ± 2%	Explore
brain	3 studies	16% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1285.50	1445 / 1445	100%	24.68	183 / 183
ovary	100%	1090.64	180 / 180	100%	38.83	430 / 430
skin	100%	1281.70	1809 / 1809	100%	37.91	472 / 472
thymus	100%	1171.48	653 / 653	100%	28.39	605 / 605
uterus	100%	1347.08	170 / 170	100%	43.74	459 / 459
lung	100%	1149.95	578 / 578	100%	31.66	1154 / 1155
brain	100%	1098.90	2639 / 2642	100%	36.40	705 / 705
breast	100%	1218.22	459 / 459	100%	35.62	1116 / 1118
prostate	100%	1405.06	245 / 245	100%	20.04	501 / 502
stomach	100%	886.20	359 / 359	100%	23.92	285 / 286
intestine	100%	1212.15	966 / 966	99%	22.78	524 / 527
bladder	100%	1420.19	21 / 21	99%	33.84	501 / 504
adrenal gland	100%	1041.38	258 / 258	99%	18.08	227 / 230
liver	100%	530.58	226 / 226	98%	24.65	397 / 406
pancreas	98%	496.95	321 / 328	99%	27.15	177 / 178
kidney	100%	1138.33	89 / 89	96%	20.01	869 / 901
adipose	100%	1213.62	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1415.83	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	24.63	80 / 80
lymph node	0%	0	0 / 0	100%	56.88	29 / 29
spleen	100%	2024.26	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	33.40	45 / 45
ureter	0%	0	0 / 0	100%	19.16	1 / 1
muscle	100%	1481.13	802 / 803	0%	0	0 / 0
heart	100%	656.16	858 / 861	0%	0	0 / 0
peripheral blood	100%	2055.75	925 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0