Name | Number of supported studies | Average coverage | |
---|---|---|---|
cardiac muscle cell | 5 studies | 45% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
heart | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 97% | 296.23 | 174 / 180 | 50% | 1.50 | 217 / 430 |
uterus | 92% | 328.03 | 156 / 170 | 21% | 0.87 | 97 / 459 |
bladder | 76% | 263.67 | 16 / 21 | 26% | 1.23 | 130 / 504 |
heart | 100% | 13274.77 | 860 / 861 | 0% | 0 | 0 / 0 |
prostate | 97% | 266.76 | 238 / 245 | 2% | 0.04 | 11 / 502 |
thymus | 74% | 79.47 | 483 / 653 | 21% | 0.48 | 126 / 605 |
intestine | 84% | 133.85 | 813 / 966 | 6% | 0.15 | 30 / 527 |
blood vessel | 87% | 290.99 | 1155 / 1335 | 0% | 0 | 0 / 0 |
muscle | 74% | 494.66 | 598 / 803 | 0% | 0 | 0 / 0 |
breast | 70% | 125.31 | 320 / 459 | 3% | 0.05 | 31 / 1118 |
esophagus | 53% | 55.34 | 763 / 1445 | 11% | 0.29 | 21 / 183 |
brain | 55% | 93.73 | 1440 / 2642 | 6% | 0.15 | 39 / 705 |
stomach | 47% | 42.86 | 167 / 359 | 10% | 0.53 | 29 / 286 |
skin | 45% | 40.92 | 814 / 1809 | 7% | 0.64 | 31 / 472 |
adipose | 48% | 47.60 | 573 / 1204 | 0% | 0 | 0 / 0 |
spleen | 38% | 53.51 | 92 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 18% | 17.31 | 46 / 258 | 17% | 0.71 | 40 / 230 |
lung | 20% | 27.93 | 116 / 578 | 11% | 0.34 | 126 / 1155 |
peripheral blood | 30% | 81.63 | 276 / 929 | 0% | 0 | 0 / 0 |
pancreas | 2% | 1.66 | 6 / 328 | 16% | 0.35 | 29 / 178 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.47 | 5 / 45 |
kidney | 8% | 6.82 | 7 / 89 | 2% | 0.09 | 21 / 901 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.64 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 5% | 0.13 | 4 / 80 |
liver | 0% | 0 | 0 / 226 | 2% | 0.07 | 7 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042475 | Biological process | odontogenesis of dentin-containing tooth |
GO_0086012 | Biological process | membrane depolarization during cardiac muscle cell action potential |
GO_0060372 | Biological process | regulation of atrial cardiac muscle cell membrane repolarization |
GO_0086067 | Biological process | AV node cell to bundle of His cell communication |
GO_0003161 | Biological process | cardiac conduction system development |
GO_0060307 | Biological process | regulation of ventricular cardiac muscle cell membrane repolarization |
GO_0086015 | Biological process | SA node cell action potential |
GO_0051899 | Biological process | membrane depolarization |
GO_0086002 | Biological process | cardiac muscle cell action potential involved in contraction |
GO_0086047 | Biological process | membrane depolarization during Purkinje myocyte cell action potential |
GO_0098912 | Biological process | membrane depolarization during atrial cardiac muscle cell action potential |
GO_0086004 | Biological process | regulation of cardiac muscle cell contraction |
GO_0086016 | Biological process | AV node cell action potential |
GO_0014894 | Biological process | response to denervation involved in regulation of muscle adaptation |
GO_0086005 | Biological process | ventricular cardiac muscle cell action potential |
GO_0002027 | Biological process | regulation of heart rate |
GO_0060373 | Biological process | regulation of ventricular cardiac muscle cell membrane depolarization |
GO_0086014 | Biological process | atrial cardiac muscle cell action potential |
GO_0060048 | Biological process | cardiac muscle contraction |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_0071277 | Biological process | cellular response to calcium ion |
GO_0003231 | Biological process | cardiac ventricle development |
GO_0086046 | Biological process | membrane depolarization during SA node cell action potential |
GO_0045760 | Biological process | positive regulation of action potential |
GO_0050679 | Biological process | positive regulation of epithelial cell proliferation |
GO_0086043 | Biological process | bundle of His cell action potential |
GO_0010765 | Biological process | positive regulation of sodium ion transport |
GO_0006814 | Biological process | sodium ion transport |
GO_0060371 | Biological process | regulation of atrial cardiac muscle cell membrane depolarization |
GO_0003360 | Biological process | brainstem development |
GO_0086045 | Biological process | membrane depolarization during AV node cell action potential |
GO_0086091 | Biological process | regulation of heart rate by cardiac conduction |
GO_0021549 | Biological process | cerebellum development |
GO_0086048 | Biological process | membrane depolarization during bundle of His cell action potential |
GO_0086010 | Biological process | membrane depolarization during action potential |
GO_1902305 | Biological process | regulation of sodium ion transmembrane transport |
GO_0021537 | Biological process | telencephalon development |
GO_0005730 | Cellular component | nucleolus |
GO_0005886 | Cellular component | plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0030018 | Cellular component | Z disc |
GO_0042383 | Cellular component | sarcolemma |
GO_0005654 | Cellular component | nucleoplasm |
GO_0009986 | Cellular component | cell surface |
GO_0030315 | Cellular component | T-tubule |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0016328 | Cellular component | lateral plasma membrane |
GO_0001518 | Cellular component | voltage-gated sodium channel complex |
GO_0005901 | Cellular component | caveola |
GO_0014704 | Cellular component | intercalated disc |
GO_0086006 | Molecular function | voltage-gated sodium channel activity involved in cardiac muscle cell action potential |
GO_0019899 | Molecular function | enzyme binding |
GO_0019904 | Molecular function | protein domain specific binding |
GO_0005248 | Molecular function | voltage-gated sodium channel activity |
GO_0050998 | Molecular function | nitric-oxide synthase binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0086060 | Molecular function | voltage-gated sodium channel activity involved in AV node cell action potential |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0097110 | Molecular function | scaffold protein binding |
GO_0086062 | Molecular function | voltage-gated sodium channel activity involved in Purkinje myocyte action potential |
GO_0044325 | Molecular function | transmembrane transporter binding |
GO_0030506 | Molecular function | ankyrin binding |
GO_0086063 | Molecular function | voltage-gated sodium channel activity involved in SA node cell action potential |
GO_0086061 | Molecular function | voltage-gated sodium channel activity involved in bundle of His cell action potential |
GO_0005516 | Molecular function | calmodulin binding |
GO_0017134 | Molecular function | fibroblast growth factor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | SCN5A |
Protein name | SCN5A protein Sodium channel protein Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5) (hH1) Cardiac sodium channel alpha subunit (Sodium voltage-gated channel alpha subunit 5) Nav1.5 Sodium voltage-gated channel alpha subunit 5 Voltage-gated sodium channel type V alpha Cardiac sodium channel alpha subunit variant Sodium channel type V alpha subunit |
Synonyms | |
Description | FUNCTION: This protein mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient . It is a tetrodotoxin-resistant Na(+) channel isoform . This channel is responsible for the initial upstroke of the action potential. Channel inactivation is regulated by intracellular calcium levels . . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . FUNCTION: Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. . |
Accessions | ENST00000327956.6 Q8WWN6 Q2QFB5 A3EY19 E9PG18 ENST00000455624.6 ENST00000327956.7 [Q14524-2] ENST00000449557.6 A3EY20 Q8WTS0 A0A0A0MT39 Q8WWN5 S5NU80 ENST00000414099.6 H9KVD2 Q8WTQ6 Q86V90 D3YHE8 Q14524 ENST00000413689.6 K4DIA1 ENST00000450102.6 A0A7R6M6R3 ENST00000333535.9 [Q14524-1] A3EY21 E9PHB6 A0A7R6M6R4 ENST00000423572.7 [Q14524-2] A3EY18 |