Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 15 studies | 41% ± 17% | |
oligodendrocyte | 14 studies | 43% ± 17% | |
oligodendrocyte precursor cell | 13 studies | 43% ± 21% | |
conventional dendritic cell | 13 studies | 27% ± 9% | |
glial cell | 6 studies | 61% ± 25% | |
dendritic cell | 5 studies | 45% ± 21% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 5 studies | 22% ± 3% | |
Schwann cell | 4 studies | 55% ± 31% | |
melanocyte | 4 studies | 46% ± 26% | |
macrophage | 3 studies | 39% ± 17% | |
retinal ganglion cell | 3 studies | 34% ± 14% | |
retinal pigment epithelial cell | 3 studies | 32% ± 18% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 38% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 32421.92 | 2638 / 2642 | 99% | 930.60 | 701 / 705 |
skin | 0% | 8.59 | 5 / 1809 | 94% | 1222.81 | 445 / 472 |
adipose | 61% | 3374.56 | 729 / 1204 | 0% | 0 | 0 / 0 |
breast | 44% | 2377.56 | 202 / 459 | 10% | 13.77 | 112 / 1118 |
eye | 0% | 0 | 0 / 0 | 54% | 59.80 | 43 / 80 |
adrenal gland | 2% | 66.34 | 5 / 258 | 47% | 68.63 | 108 / 230 |
intestine | 38% | 2095.05 | 366 / 966 | 0% | 0.17 | 1 / 527 |
esophagus | 20% | 784.78 | 287 / 1445 | 1% | 1.40 | 2 / 183 |
tonsil | 0% | 0 | 0 / 0 | 13% | 7.25 | 6 / 45 |
prostate | 11% | 445.02 | 27 / 245 | 0% | 0.18 | 2 / 502 |
pancreas | 0% | 0 | 0 / 328 | 11% | 8.73 | 20 / 178 |
thymus | 0% | 8.66 | 2 / 653 | 10% | 7.94 | 63 / 605 |
uterus | 2% | 71.76 | 4 / 170 | 7% | 4.66 | 32 / 459 |
lung | 0% | 4.31 | 1 / 578 | 8% | 5.78 | 93 / 1155 |
stomach | 8% | 317.55 | 27 / 359 | 1% | 0.36 | 2 / 286 |
blood vessel | 6% | 315.77 | 76 / 1335 | 0% | 0 | 0 / 0 |
spleen | 5% | 136.48 | 12 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 1.82 | 1 / 29 |
bladder | 0% | 0 | 0 / 21 | 3% | 1.91 | 13 / 504 |
ovary | 1% | 21.58 | 1 / 180 | 1% | 0.56 | 4 / 430 |
heart | 1% | 33.13 | 10 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 21.79 | 5 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.30 | 2 / 406 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.14 | 2 / 901 |
muscle | 0% | 2.93 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007611 | Biological process | learning or memory |
GO_0007155 | Biological process | cell adhesion |
GO_1990845 | Biological process | adaptive thermogenesis |
GO_0007409 | Biological process | axonogenesis |
GO_0048168 | Biological process | regulation of neuronal synaptic plasticity |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0007417 | Biological process | central nervous system development |
GO_0007613 | Biological process | memory |
GO_0097490 | Biological process | sympathetic neuron projection extension |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0045666 | Biological process | positive regulation of neuron differentiation |
GO_0001726 | Cellular component | ruffle |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0048306 | Molecular function | calcium-dependent protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0048156 | Molecular function | tau protein binding |
GO_0044548 | Molecular function | S100 protein binding |
GO_0050786 | Molecular function | RAGE receptor binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | S100B |
Protein name | S100 calcium binding protein B Protein S100 (S100 calcium-binding protein) Protein S100-B (S-100 protein beta chain) (S-100 protein subunit beta) (S100 calcium-binding protein B) |
Synonyms | |
Description | FUNCTION: Small zinc- and- and calcium-binding protein that is highly expressed in astrocytes and constitutes one of the most abundant soluble proteins in brain . Weakly binds calcium but binds zinc very tightly-distinct binding sites with different affinities exist for both ions on each monomer . Physiological concentrations of potassium ion antagonize the binding of both divalent cations, especially affecting high-affinity calcium-binding sites (By similarity). Acts as a neurotrophic factor that promotes astrocytosis and axonal proliferation (By similarity). Involved in innervation of thermogenic adipose tissue by acting as an adipocyte-derived neurotrophic factor that promotes sympathetic innervation of adipose tissue (By similarity). Binds to and initiates the activation of STK38 by releasing autoinhibitory intramolecular interactions within the kinase (By similarity). Interaction with AGER after myocardial infarction may play a role in myocyte apoptosis by activating ERK1/2 and p53/TP53 signaling (By similarity). Could assist ATAD3A cytoplasmic processing, preventing aggregation and favoring mitochondrial localization . May mediate calcium-dependent regulation on many physiological processes by interacting with other proteins, such as TPR-containing proteins, and modulating their activity . . |
Accessions | P04271 A8MRB1 A0A0S2Z4C5 ENST00000291700.9 ENST00000367071.4 ENST00000397648.1 |