Insufficient scRNA-seq data for expression of RPA4 at single-cell level.
Insufficient scRNA-seq data for expression of RPA4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 85% | 12.73 | 1225 / 1445 | 27% | 0.41 | 50 / 183 |
lung | 94% | 25.94 | 546 / 578 | 6% | 0.13 | 70 / 1155 |
adipose | 97% | 25.17 | 1169 / 1204 | 0% | 0 | 0 / 0 |
ovary | 94% | 18.86 | 170 / 180 | 2% | 0.03 | 9 / 430 |
bladder | 90% | 16.19 | 19 / 21 | 4% | 0.11 | 21 / 504 |
blood vessel | 93% | 20.79 | 1244 / 1335 | 0% | 0 | 0 / 0 |
intestine | 85% | 11.76 | 824 / 966 | 5% | 0.10 | 28 / 527 |
prostate | 88% | 14.63 | 216 / 245 | 2% | 0.05 | 10 / 502 |
liver | 88% | 17.10 | 199 / 226 | 0% | 0 | 0 / 406 |
skin | 85% | 12.43 | 1529 / 1809 | 2% | 0.04 | 10 / 472 |
breast | 85% | 15.81 | 388 / 459 | 2% | 0.04 | 17 / 1118 |
spleen | 86% | 9.17 | 207 / 241 | 0% | 0 | 0 / 0 |
stomach | 72% | 8.45 | 260 / 359 | 9% | 0.18 | 27 / 286 |
uterus | 76% | 13.51 | 130 / 170 | 2% | 0.04 | 11 / 459 |
muscle | 78% | 9.04 | 624 / 803 | 0% | 0 | 0 / 0 |
heart | 77% | 12.01 | 660 / 861 | 0% | 0 | 0 / 0 |
thymus | 75% | 10.51 | 492 / 653 | 0% | 0.01 | 2 / 605 |
kidney | 73% | 8.25 | 65 / 89 | 2% | 0.04 | 19 / 901 |
adrenal gland | 62% | 6.59 | 160 / 258 | 0% | 0.00 | 1 / 230 |
pancreas | 52% | 4.11 | 169 / 328 | 2% | 0.05 | 3 / 178 |
peripheral blood | 43% | 4.53 | 400 / 929 | 0% | 0 | 0 / 0 |
brain | 40% | 3.10 | 1068 / 2642 | 0% | 0.01 | 3 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006289 | Biological process | nucleotide-excision repair |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0006281 | Biological process | DNA repair |
GO_0006270 | Biological process | DNA replication initiation |
GO_0033260 | Biological process | nuclear DNA replication |
GO_0006260 | Biological process | DNA replication |
GO_0000077 | Biological process | DNA damage checkpoint signaling |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005662 | Cellular component | DNA replication factor A complex |
GO_0035861 | Cellular component | site of double-strand break |
GO_0005634 | Cellular component | nucleus |
GO_0042162 | Molecular function | telomeric DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003697 | Molecular function | single-stranded DNA binding |
Gene name | RPA4 |
Protein name | Replication protein A 30 kDa subunit (RP-A p30) (Replication factor A protein 4) (RF-A protein 4) |
Synonyms | |
Description | FUNCTION: As part of the alternative replication protein A complex, aRPA, binds single-stranded DNA and probably plays a role in DNA repair. Compared to the RPA2-containing, canonical RPA complex, may not support chromosomal DNA replication and cell cycle progression through S-phase. The aRPA may not promote efficient priming by DNA polymerase alpha but could support DNA polymerase delta synthesis in the presence of PCNA and replication factor C (RFC), the dual incision/excision reaction of nucleotide excision repair and RAD51-dependent strand exchange. . |
Accessions | ENST00000373040.4 Q13156 |