Name | Number of supported studies | Average coverage | |
---|---|---|---|
monocyte | 4 studies | 24% ± 8% | |
classical monocyte | 4 studies | 27% ± 10% | |
myeloid cell | 3 studies | 25% ± 8% | |
epithelial cell | 3 studies | 28% ± 3% | |
macrophage | 3 studies | 20% ± 1% |
Insufficient scRNA-seq data for expression of RNF19B at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 1062.90 | 359 / 359 | 100% | 61.31 | 286 / 286 |
esophagus | 100% | 2129.62 | 1444 / 1445 | 100% | 78.72 | 183 / 183 |
lung | 100% | 2182.47 | 578 / 578 | 100% | 78.61 | 1152 / 1155 |
intestine | 100% | 2109.92 | 966 / 966 | 100% | 66.99 | 525 / 527 |
ovary | 100% | 1116.48 | 180 / 180 | 99% | 56.47 | 427 / 430 |
breast | 100% | 1372.96 | 459 / 459 | 99% | 53.00 | 1105 / 1118 |
skin | 100% | 2000.44 | 1809 / 1809 | 99% | 76.18 | 465 / 472 |
bladder | 100% | 1622.86 | 21 / 21 | 98% | 64.40 | 492 / 504 |
uterus | 100% | 1731.64 | 170 / 170 | 98% | 85.06 | 448 / 459 |
thymus | 100% | 1192.16 | 653 / 653 | 98% | 42.72 | 590 / 605 |
prostate | 100% | 1397.07 | 245 / 245 | 97% | 34.29 | 488 / 502 |
brain | 95% | 1059.19 | 2510 / 2642 | 99% | 34.30 | 697 / 705 |
kidney | 100% | 1681.48 | 89 / 89 | 93% | 43.56 | 836 / 901 |
pancreas | 86% | 549.32 | 283 / 328 | 98% | 64.62 | 175 / 178 |
adrenal gland | 100% | 1544.54 | 258 / 258 | 63% | 14.06 | 146 / 230 |
liver | 85% | 567.18 | 192 / 226 | 63% | 15.20 | 257 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 63.88 | 29 / 29 |
spleen | 100% | 1548.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 123.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 31.67 | 1 / 1 |
blood vessel | 100% | 1997.70 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1575.43 | 1202 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 1115.18 | 797 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3120.64 | 922 / 929 | 0% | 0 | 0 / 0 |
heart | 93% | 731.25 | 803 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 19.55 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002250 | Biological process | adaptive immune response |
GO_0051865 | Biological process | protein autoubiquitination |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0000209 | Biological process | protein polyubiquitination |
GO_0042267 | Biological process | natural killer cell mediated cytotoxicity |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0044194 | Cellular component | cytolytic granule |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0031624 | Molecular function | ubiquitin conjugating enzyme binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0043130 | Molecular function | ubiquitin binding |
Gene name | RNF19B |
Protein name | E3 ubiquitin-protein ligase RNF19B (EC 2.3.2.31) (IBR domain-containing protein 3) (Natural killer lytic-associated molecule) (RING finger protein 19B) |
Synonyms | IBRDC3 NKLAM |
Description | FUNCTION: E3 ubiquitin-protein ligase which accepts ubiquitin from E2 ubiquitin-conjugating enzymes UBE2L3 and UBE2L6 in the form of a thioester and then directly transfers the ubiquitin to targeted substrates, such as UCKL1 . Involved in the cytolytic activity of natural killer cells and cytotoxic T-cells . Protects against staurosporin-induced cell death . . |
Accessions | Q6ZMZ0 ENST00000356990.9 [Q6ZMZ0-2] ENST00000373456.11 [Q6ZMZ0-1] ENST00000235150.5 [Q6ZMZ0-4] |