Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 28% ± 11% | |
oligodendrocyte precursor cell | 11 studies | 27% ± 13% | |
oligodendrocyte | 11 studies | 27% ± 10% | |
microglial cell | 10 studies | 27% ± 8% | |
fibroblast | 10 studies | 24% ± 9% | |
astrocyte | 10 studies | 32% ± 14% | |
glutamatergic neuron | 9 studies | 42% ± 25% | |
basal cell | 9 studies | 29% ± 15% | |
ciliated cell | 9 studies | 26% ± 10% | |
macrophage | 7 studies | 32% ± 8% | |
epithelial cell | 7 studies | 33% ± 17% | |
GABAergic neuron | 7 studies | 44% ± 22% | |
neuron | 6 studies | 34% ± 15% | |
amacrine cell | 6 studies | 24% ± 6% | |
interneuron | 6 studies | 42% ± 24% | |
adipocyte | 6 studies | 26% ± 6% | |
type I pneumocyte | 6 studies | 23% ± 6% | |
type II pneumocyte | 6 studies | 33% ± 9% | |
retina horizontal cell | 5 studies | 29% ± 9% | |
cardiac muscle cell | 5 studies | 26% ± 6% | |
dendritic cell | 5 studies | 20% ± 6% | |
endothelial cell of lymphatic vessel | 5 studies | 24% ± 6% | |
club cell | 5 studies | 25% ± 8% | |
retinal bipolar neuron | 4 studies | 20% ± 2% | |
granule cell | 4 studies | 27% ± 7% | |
myeloid cell | 4 studies | 19% ± 3% | |
pericyte | 4 studies | 22% ± 6% | |
smooth muscle cell | 4 studies | 20% ± 1% | |
hematopoietic precursor cell | 3 studies | 20% ± 4% | |
GABAergic interneuron | 3 studies | 25% ± 3% | |
lymphocyte | 3 studies | 21% ± 6% | |
rod bipolar cell | 3 studies | 28% ± 10% | |
respiratory goblet cell | 3 studies | 20% ± 5% | |
hepatocyte | 3 studies | 38% ± 21% | |
ependymal cell | 3 studies | 30% ± 12% | |
alveolar macrophage | 3 studies | 24% ± 5% | |
monocyte | 3 studies | 20% ± 3% | |
mast cell | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2695.91 | 1445 / 1445 | 100% | 16.67 | 183 / 183 |
lung | 100% | 3004.07 | 578 / 578 | 100% | 15.42 | 1150 / 1155 |
intestine | 100% | 2677.97 | 966 / 966 | 99% | 10.77 | 523 / 527 |
prostate | 100% | 3413.17 | 245 / 245 | 99% | 15.56 | 497 / 502 |
breast | 100% | 3107.83 | 459 / 459 | 99% | 14.65 | 1106 / 1118 |
bladder | 100% | 3119.67 | 21 / 21 | 99% | 13.52 | 498 / 504 |
pancreas | 100% | 1231.24 | 328 / 328 | 98% | 12.53 | 175 / 178 |
stomach | 100% | 1923.46 | 359 / 359 | 98% | 10.32 | 281 / 286 |
brain | 98% | 2212.44 | 2587 / 2642 | 100% | 14.81 | 703 / 705 |
uterus | 100% | 3722.52 | 170 / 170 | 98% | 16.32 | 448 / 459 |
thymus | 100% | 3380.46 | 653 / 653 | 97% | 13.76 | 587 / 605 |
kidney | 100% | 2325.39 | 89 / 89 | 95% | 10.98 | 854 / 901 |
ovary | 100% | 3573.41 | 180 / 180 | 95% | 8.74 | 407 / 430 |
adrenal gland | 100% | 3175.39 | 258 / 258 | 93% | 10.96 | 214 / 230 |
skin | 100% | 2706.30 | 1809 / 1809 | 93% | 11.29 | 437 / 472 |
liver | 100% | 1185.18 | 226 / 226 | 80% | 5.54 | 325 / 406 |
adipose | 100% | 2877.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2530.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2041.61 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2414.04 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.76 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 16.85 | 44 / 45 |
heart | 98% | 2130.09 | 840 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 8.86 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 69% | 6.50 | 55 / 80 |
peripheral blood | 59% | 903.75 | 544 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070987 | Biological process | error-free translesion synthesis |
GO_0009411 | Biological process | response to UV |
GO_0006260 | Biological process | DNA replication |
GO_0042276 | Biological process | error-prone translesion synthesis |
GO_0005654 | Cellular component | nucleoplasm |
GO_0017125 | Molecular function | deoxycytidyl transferase activity |
GO_0003887 | Molecular function | DNA-directed DNA polymerase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003684 | Molecular function | damaged DNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | REV1 |
Protein name | DNA repair protein REV1 (EC 2.7.7.-) REV1 DNA directed polymerase DNA repair protein REV1 (EC 2.7.7.-) (Alpha integrin-binding protein 80) (AIBP80) (Rev1-like terminal deoxycytidyl transferase) |
Synonyms | REV1L |
Description | FUNCTION: Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents. . FUNCTION: Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents. . FUNCTION: Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents. . |
Accessions | F8WCR0 ENST00000438366.1 ENST00000413697.5 Q9UBZ9 ENST00000393445.7 [Q9UBZ9-2] C9JPS2 ENST00000450415.1 Q49AI5 H7C263 ENST00000258428.8 [Q9UBZ9-1] A1L461 |