Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| fibroblast | 32 studies | 41% ± 17% | |
| endothelial cell | 28 studies | 34% ± 14% | |
| pericyte | 18 studies | 34% ± 12% | |
| connective tissue cell | 15 studies | 47% ± 21% | |
| myofibroblast cell | 13 studies | 34% ± 15% | |
| smooth muscle cell | 13 studies | 26% ± 7% | |
| endothelial cell of lymphatic vessel | 12 studies | 27% ± 10% | |
| capillary endothelial cell | 12 studies | 26% ± 7% | |
| epithelial cell | 11 studies | 41% ± 21% | |
| vein endothelial cell | 11 studies | 29% ± 4% | |
| endothelial cell of artery | 10 studies | 29% ± 6% | |
| endothelial cell of vascular tree | 9 studies | 29% ± 8% | |
| basal cell | 7 studies | 29% ± 15% | |
| abnormal cell | 6 studies | 33% ± 15% | |
| mesothelial cell | 6 studies | 37% ± 17% | |
| progenitor cell | 5 studies | 34% ± 12% | |
| ciliated cell | 5 studies | 35% ± 11% | |
| Mueller cell | 5 studies | 51% ± 19% | |
| oligodendrocyte precursor cell | 5 studies | 26% ± 7% | |
| astrocyte | 4 studies | 32% ± 8% | |
| adventitial cell | 4 studies | 24% ± 4% | |
| enteroendocrine cell | 4 studies | 29% ± 10% | |
| secretory cell | 4 studies | 23% ± 8% | |
| pancreatic A cell | 3 studies | 43% ± 5% | |
| type B pancreatic cell | 3 studies | 30% ± 3% | |
| neural crest cell | 3 studies | 32% ± 5% | |
| glial cell | 3 studies | 32% ± 20% | |
| retinal ganglion cell | 3 studies | 49% ± 24% | |
| extravillous trophoblast | 3 studies | 41% ± 14% | |
| placental villous trophoblast | 3 studies | 56% ± 19% | |
| type I pneumocyte | 3 studies | 27% ± 8% | |
| myoepithelial cell | 3 studies | 33% ± 19% | |
| goblet cell | 3 studies | 30% ± 11% | |
| intestinal crypt stem cell | 3 studies | 24% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 6158.60 | 245 / 245 | 100% | 60.49 | 502 / 502 |
| bladder | 100% | 6907.38 | 21 / 21 | 100% | 63.11 | 503 / 504 |
| ovary | 100% | 6365.25 | 180 / 180 | 100% | 43.56 | 429 / 430 |
| thymus | 100% | 4123.96 | 652 / 653 | 99% | 26.52 | 601 / 605 |
| uterus | 100% | 5478.65 | 170 / 170 | 99% | 52.87 | 455 / 459 |
| intestine | 100% | 3500.83 | 966 / 966 | 99% | 46.55 | 522 / 527 |
| lung | 100% | 5489.02 | 577 / 578 | 99% | 35.82 | 1146 / 1155 |
| esophagus | 99% | 2823.06 | 1436 / 1445 | 99% | 35.55 | 181 / 183 |
| breast | 100% | 6149.09 | 459 / 459 | 97% | 38.39 | 1089 / 1118 |
| stomach | 98% | 2571.57 | 352 / 359 | 97% | 44.43 | 278 / 286 |
| kidney | 98% | 2981.88 | 87 / 89 | 97% | 37.98 | 875 / 901 |
| brain | 94% | 2374.08 | 2496 / 2642 | 100% | 33.65 | 702 / 705 |
| skin | 100% | 9117.24 | 1804 / 1809 | 93% | 33.02 | 439 / 472 |
| liver | 100% | 3042.62 | 226 / 226 | 91% | 28.72 | 370 / 406 |
| adrenal gland | 100% | 4754.47 | 258 / 258 | 87% | 20.60 | 200 / 230 |
| pancreas | 67% | 972.30 | 219 / 328 | 99% | 41.47 | 177 / 178 |
| adipose | 100% | 6994.52 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 5746.26 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2730.72 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 30.09 | 1 / 1 |
| heart | 98% | 2633.73 | 844 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 16.87 | 28 / 29 |
| eye | 0% | 0 | 0 / 0 | 96% | 24.24 | 77 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 93% | 26.37 | 42 / 45 |
| muscle | 92% | 1676.42 | 740 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 19% | 830.22 | 179 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0043010 | Biological process | camera-type eye development |
| GO_0001701 | Biological process | in utero embryonic development |
| GO_0005788 | Cellular component | endoplasmic reticulum lumen |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | RCN1 |
| Protein name | Reticulocalbin-1 Reticulocalbin 1 |
| Synonyms | RCN |
| Description | FUNCTION: May regulate calcium-dependent activities in the endoplasmic reticulum lumen or post-ER compartment. |
| Accessions | ENST00000527337.1 E9PLM2 Q15293 H0YER5 ENST00000532721.1 ENST00000054950.4 [Q15293-1] ENST00000528630.1 H0YDA4 |