Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 32 studies | 29% ± 12% | |
endothelial cell of lymphatic vessel | 17 studies | 36% ± 14% | |
fibroblast | 10 studies | 32% ± 20% | |
vein endothelial cell | 10 studies | 31% ± 18% | |
endothelial cell of vascular tree | 9 studies | 35% ± 17% | |
type I pneumocyte | 8 studies | 31% ± 12% | |
basal cell | 8 studies | 23% ± 10% | |
capillary endothelial cell | 7 studies | 26% ± 8% | |
type II pneumocyte | 7 studies | 42% ± 14% | |
respiratory goblet cell | 6 studies | 38% ± 15% | |
smooth muscle cell | 6 studies | 20% ± 3% | |
club cell | 6 studies | 35% ± 13% | |
retinal cone cell | 6 studies | 26% ± 3% | |
astrocyte | 6 studies | 32% ± 11% | |
oligodendrocyte | 6 studies | 26% ± 7% | |
secretory cell | 4 studies | 29% ± 5% | |
connective tissue cell | 4 studies | 33% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 23% ± 6% | |
epithelial cell | 4 studies | 29% ± 6% | |
retinal pigment epithelial cell | 4 studies | 32% ± 20% | |
Mueller cell | 4 studies | 25% ± 10% | |
glutamatergic neuron | 4 studies | 23% ± 3% | |
progenitor cell | 3 studies | 22% ± 5% | |
endothelial cell of artery | 3 studies | 17% ± 2% | |
ciliated cell | 3 studies | 27% ± 5% | |
hepatocyte | 3 studies | 35% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 4388.37 | 577 / 578 | 99% | 68.54 | 1147 / 1155 |
breast | 98% | 2445.74 | 448 / 459 | 98% | 34.79 | 1097 / 1118 |
skin | 100% | 7207.01 | 1807 / 1809 | 96% | 37.12 | 452 / 472 |
bladder | 100% | 5552.71 | 21 / 21 | 94% | 40.89 | 476 / 504 |
uterus | 100% | 8399.99 | 170 / 170 | 94% | 39.19 | 431 / 459 |
esophagus | 94% | 2712.91 | 1363 / 1445 | 99% | 44.50 | 182 / 183 |
kidney | 100% | 3068.03 | 89 / 89 | 93% | 28.39 | 839 / 901 |
ovary | 99% | 2087.12 | 178 / 180 | 93% | 26.25 | 400 / 430 |
prostate | 99% | 2912.81 | 243 / 245 | 88% | 15.36 | 441 / 502 |
liver | 99% | 1848.88 | 223 / 226 | 87% | 16.92 | 355 / 406 |
stomach | 93% | 2119.98 | 335 / 359 | 90% | 22.44 | 258 / 286 |
thymus | 100% | 2426.98 | 652 / 653 | 82% | 14.80 | 494 / 605 |
intestine | 94% | 3424.56 | 910 / 966 | 80% | 16.62 | 424 / 527 |
pancreas | 75% | 888.00 | 247 / 328 | 97% | 33.80 | 172 / 178 |
adrenal gland | 100% | 1916.08 | 257 / 258 | 48% | 9.16 | 111 / 230 |
brain | 57% | 896.31 | 1496 / 2642 | 72% | 10.18 | 508 / 705 |
spleen | 100% | 7062.06 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.46 | 1 / 1 |
blood vessel | 100% | 5393.25 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 2372.16 | 1173 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 21.96 | 72 / 80 |
tonsil | 0% | 0 | 0 / 0 | 89% | 31.25 | 40 / 45 |
heart | 56% | 735.04 | 481 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 6.63 | 12 / 29 |
muscle | 5% | 46.39 | 38 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 3.99 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0001725 | Cellular component | stress fiber |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005938 | Cellular component | cell cortex |
GO_0070161 | Cellular component | anchoring junction |
GO_0001650 | Cellular component | fibrillar center |
GO_0005515 | Molecular function | protein binding |
Gene name | RAI14 |
Protein name | Retinoic acid induced 14 Ankycorbin (Ankyrin repeat and coiled-coil structure-containing protein) (Novel retinal pigment epithelial cell protein) (Retinoic acid-induced protein 14) |
Synonyms | KIAA1334 NORPEG |
Description | FUNCTION: Plays a role in actin regulation at the ectoplasmic specialization, a type of cell junction specific to testis. Important for establishment of sperm polarity and normal spermatid adhesion. May also promote integrity of Sertoli cell tight junctions at the blood-testis barrier. . |
Accessions | D6RBY4 ENST00000428746.6 [Q9P0K7-1] ENST00000512305.5 ENST00000503673.5 [Q9P0K7-1] D6RE17 D6RF74 ENST00000515448.5 D6REL2 ENST00000265109.8 [Q9P0K7-1] ENST00000508777.5 D6RB27 Q9P0K7 D6R9G6 ENST00000508315.5 ENST00000514527.5 D6RDL2 D6RB25 ENST00000512625.5 ENST00000514036.5 ENST00000506376.1 [Q9P0K7-3] ENST00000504052.5 D6R9G4 ENST00000512629.5 [Q9P0K7-4] ENST00000515799.5 [Q9P0K7-2] ENST00000513974.5 ENST00000510319.5 D6RBW6 ENST00000514873.5 ENST00000503222.5 |