Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 12 studies | 20% ± 3% | |
naive B cell | 6 studies | 20% ± 2% | |
epithelial cell | 5 studies | 22% ± 4% | |
memory B cell | 4 studies | 18% ± 1% | |
goblet cell | 3 studies | 20% ± 2% |
Insufficient scRNA-seq data for expression of RABEP2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 1202.13 | 328 / 328 | 100% | 25.29 | 178 / 178 |
prostate | 100% | 3741.13 | 245 / 245 | 100% | 88.62 | 502 / 502 |
uterus | 100% | 1146.64 | 170 / 170 | 100% | 26.98 | 459 / 459 |
esophagus | 100% | 1446.50 | 1444 / 1445 | 100% | 16.17 | 183 / 183 |
thymus | 100% | 1972.20 | 653 / 653 | 100% | 25.80 | 604 / 605 |
intestine | 100% | 1891.92 | 966 / 966 | 99% | 24.08 | 523 / 527 |
kidney | 100% | 1920.37 | 89 / 89 | 99% | 20.18 | 894 / 901 |
ovary | 100% | 794.42 | 180 / 180 | 99% | 14.90 | 426 / 430 |
bladder | 100% | 1616.29 | 21 / 21 | 99% | 31.43 | 499 / 504 |
adrenal gland | 100% | 2598.12 | 258 / 258 | 99% | 26.88 | 227 / 230 |
skin | 100% | 2398.33 | 1809 / 1809 | 99% | 20.43 | 465 / 472 |
lung | 100% | 1395.69 | 577 / 578 | 98% | 20.67 | 1136 / 1155 |
breast | 100% | 1315.72 | 459 / 459 | 98% | 28.54 | 1096 / 1118 |
stomach | 100% | 1363.00 | 358 / 359 | 98% | 21.28 | 281 / 286 |
brain | 99% | 791.67 | 2610 / 2642 | 98% | 12.76 | 691 / 705 |
liver | 100% | 697.49 | 225 / 226 | 87% | 10.91 | 353 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.28 | 29 / 29 |
spleen | 100% | 4697.14 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.02 | 1 / 1 |
adipose | 100% | 967.17 | 1199 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 987.74 | 1328 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1230.57 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 18.32 | 79 / 80 |
peripheral blood | 94% | 1287.67 | 876 / 929 | 0% | 0 | 0 / 0 |
muscle | 70% | 317.43 | 561 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0015031 | Biological process | protein transport |
GO_0006897 | Biological process | endocytosis |
GO_0030030 | Biological process | cell projection organization |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005813 | Cellular component | centrosome |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005829 | Cellular component | cytosol |
GO_0005769 | Cellular component | early endosome |
GO_0005515 | Molecular function | protein binding |
GO_0008083 | Molecular function | growth factor activity |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | RABEP2 |
Protein name | Rabaptin, RAB GTPase binding effector protein 2 Rab GTPase-binding effector protein 2 Rab GTPase-binding effector protein 2 (Rabaptin-5beta) |
Synonyms | RABPT5B |
Description | FUNCTION: Plays a role in membrane trafficking and in homotypic early endosome fusion . Participates in arteriogenesis by regulating vascular endothelial growth factor receptor 2/VEGFR2 cell surface expression and endosomal trafficking . By interacting with SDCCAG8, localizes to centrosomes and plays a critical role in ciliogenesis . . |
Accessions | ENST00000567483.5 ENST00000568703.5 B4DHR0 Q9H5N1 H3BMR7 ENST00000566762.1 H3BNR8 H3BNR2 ENST00000357573.10 [Q9H5N1-2] Q49AT6 ENST00000563577.1 ENST00000358201.9 [Q9H5N1-1] ENST00000561501.5 H3BU67 H3BT64 ENST00000544477.5 |