Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 9 studies | 32% ± 21% | |
| smooth muscle cell | 6 studies | 29% ± 18% | |
| neuron | 5 studies | 22% ± 5% | |
| retinal cone cell | 4 studies | 25% ± 4% | |
| retinal rod cell | 4 studies | 24% ± 4% | |
| GABAergic neuron | 3 studies | 41% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 93% | 27543.71 | 2463 / 2642 | 98% | 57.06 | 690 / 705 |
| uterus | 75% | 7768.65 | 127 / 170 | 41% | 8.90 | 188 / 459 |
| bladder | 71% | 10824.86 | 15 / 21 | 35% | 3.80 | 178 / 504 |
| ovary | 27% | 1012.08 | 49 / 180 | 73% | 5.19 | 316 / 430 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.57 | 1 / 1 |
| intestine | 71% | 16157.55 | 689 / 966 | 28% | 2.02 | 146 / 527 |
| pancreas | 0% | 9.01 | 1 / 328 | 90% | 12.33 | 160 / 178 |
| adrenal gland | 4% | 194.22 | 11 / 258 | 80% | 68.45 | 184 / 230 |
| stomach | 35% | 4224.05 | 126 / 359 | 37% | 3.70 | 107 / 286 |
| esophagus | 52% | 4937.70 | 751 / 1445 | 20% | 1.07 | 36 / 183 |
| lymph node | 0% | 0 | 0 / 0 | 66% | 2.11 | 19 / 29 |
| lung | 0% | 0 | 0 / 578 | 46% | 3.03 | 526 / 1155 |
| thymus | 0% | 0 | 0 / 653 | 41% | 1.64 | 247 / 605 |
| skin | 0% | 2.09 | 1 / 1809 | 37% | 2.50 | 174 / 472 |
| prostate | 2% | 80.85 | 4 / 245 | 32% | 1.03 | 161 / 502 |
| breast | 0% | 5.32 | 1 / 459 | 32% | 1.65 | 360 / 1118 |
| eye | 0% | 0 | 0 / 0 | 23% | 2.16 | 18 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 13% | 0.70 | 6 / 45 |
| liver | 0% | 0 | 0 / 226 | 11% | 0.40 | 44 / 406 |
| kidney | 0% | 0 | 0 / 89 | 6% | 0.27 | 54 / 901 |
| blood vessel | 0% | 2.62 | 1 / 1335 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| GO_0007165 | Biological process | signal transduction |
| GO_0032012 | Biological process | regulation of ARF protein signal transduction |
| GO_0031175 | Biological process | neuron projection development |
| GO_0032587 | Cellular component | ruffle membrane |
| GO_0032154 | Cellular component | cleavage furrow |
| GO_0099092 | Cellular component | postsynaptic density, intracellular component |
| GO_0043197 | Cellular component | dendritic spine |
| GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0005543 | Molecular function | phospholipid binding |
| Gene name | PSD |
| Protein name | PH and SEC7 domain-containing protein 1 (Exchange factor for ADP-ribosylation factor guanine nucleotide factor 6) (Exchange factor for ARF6) (Exchange factor for ARF6 A) (Pleckstrin homology and SEC7 domain-containing protein 1) PSD protein Alternative protein PSD Pleckstrin and Sec7 domain containing |
| Synonyms | EFA6 KIAA2011 EFA6A PSD1 TYL |
| Description | FUNCTION: Guanine nucleotide exchange factor for ARF6 . Induces cytoskeletal remodeling (By similarity). . |
| Accessions | L0R6N0 ENST00000611678.4 [A5PKW4-2] ENST00000020673.6 [A5PKW4-1] Q86YI3 A5PKW4 ENST00000406432.5 [A5PKW4-1] A0A1B0GUT6 ENST00000461698.5 |
