Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 52% ± 19% | |
endothelial cell | 13 studies | 34% ± 14% | |
glutamatergic neuron | 10 studies | 49% ± 26% | |
mast cell | 9 studies | 40% ± 16% | |
GABAergic neuron | 7 studies | 54% ± 25% | |
retinal cone cell | 6 studies | 36% ± 14% | |
interneuron | 5 studies | 57% ± 23% | |
oligodendrocyte precursor cell | 5 studies | 27% ± 7% | |
granule cell | 4 studies | 50% ± 14% | |
microglial cell | 4 studies | 30% ± 15% | |
epithelial cell | 4 studies | 30% ± 20% | |
ciliated cell | 4 studies | 28% ± 7% | |
retinal rod cell | 4 studies | 38% ± 6% | |
astrocyte | 4 studies | 30% ± 16% | |
neuron | 3 studies | 36% ± 21% | |
GABAergic interneuron | 3 studies | 33% ± 11% | |
amacrine cell | 3 studies | 37% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 94% | 2044.63 | 231 / 245 | 100% | 82.28 | 502 / 502 |
pancreas | 96% | 647.13 | 316 / 328 | 90% | 13.10 | 160 / 178 |
brain | 100% | 4320.38 | 2634 / 2642 | 82% | 11.64 | 577 / 705 |
breast | 81% | 779.18 | 374 / 459 | 93% | 28.80 | 1041 / 1118 |
ovary | 93% | 2951.54 | 167 / 180 | 80% | 11.88 | 342 / 430 |
stomach | 76% | 1021.53 | 273 / 359 | 93% | 23.31 | 267 / 286 |
kidney | 100% | 1774.29 | 89 / 89 | 68% | 11.90 | 612 / 901 |
intestine | 62% | 293.06 | 602 / 966 | 93% | 20.04 | 492 / 527 |
thymus | 89% | 581.98 | 581 / 653 | 58% | 6.36 | 348 / 605 |
lung | 67% | 420.21 | 386 / 578 | 78% | 13.53 | 902 / 1155 |
liver | 88% | 519.00 | 200 / 226 | 35% | 5.16 | 143 / 406 |
bladder | 48% | 453.00 | 10 / 21 | 71% | 13.72 | 359 / 504 |
adrenal gland | 45% | 211.01 | 116 / 258 | 70% | 11.51 | 160 / 230 |
uterus | 68% | 834.32 | 116 / 170 | 45% | 8.94 | 205 / 459 |
skin | 18% | 86.36 | 328 / 1809 | 84% | 20.27 | 397 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.98 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 94% | 19.19 | 75 / 80 |
blood vessel | 88% | 718.13 | 1174 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 10% | 42.48 | 141 / 1445 | 61% | 11.86 | 111 / 183 |
adipose | 60% | 333.35 | 723 / 1204 | 0% | 0 | 0 / 0 |
heart | 50% | 250.18 | 428 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 38% | 5.19 | 17 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.32 | 4 / 29 |
muscle | 13% | 61.10 | 105 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 12% | 52.06 | 114 / 929 | 0% | 0 | 0 / 0 |
spleen | 9% | 32.85 | 22 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006470 | Biological process | protein dephosphorylation |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0004741 | Molecular function | [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity |
GO_0004721 | Molecular function | phosphoprotein phosphatase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0017018 | Molecular function | myosin phosphatase activity |
Gene name | PPM1H |
Protein name | SRGAP1/PPM1H fusion protein Protein phosphatase 1H (EC 3.1.3.16) |
Synonyms | KIAA1157 ARHCL1 SRGAP1 fusion URCC2 |
Description | FUNCTION: Dephosphorylates CDKN1B at 'Thr-187', thus removing a signal for proteasomal degradation. . |
Accessions | S5ZYJ2 Q9ULR3 ENST00000228705.7 |