Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 49 studies | 45% ± 20% | |
endothelial cell of lymphatic vessel | 29 studies | 80% ± 13% | |
fibroblast | 29 studies | 33% ± 15% | |
pericyte | 23 studies | 30% ± 14% | |
capillary endothelial cell | 16 studies | 40% ± 13% | |
oligodendrocyte | 13 studies | 36% ± 12% | |
oligodendrocyte precursor cell | 13 studies | 36% ± 14% | |
endothelial cell of vascular tree | 13 studies | 33% ± 15% | |
smooth muscle cell | 12 studies | 36% ± 22% | |
endothelial cell of artery | 12 studies | 25% ± 6% | |
glutamatergic neuron | 11 studies | 49% ± 24% | |
vein endothelial cell | 11 studies | 32% ± 16% | |
type I pneumocyte | 10 studies | 37% ± 15% | |
basal cell | 10 studies | 32% ± 19% | |
GABAergic neuron | 8 studies | 41% ± 16% | |
neuron | 8 studies | 32% ± 15% | |
myofibroblast cell | 7 studies | 25% ± 6% | |
epithelial cell | 7 studies | 40% ± 19% | |
cardiac muscle cell | 6 studies | 59% ± 23% | |
connective tissue cell | 6 studies | 27% ± 11% | |
epithelial cell of proximal tubule | 5 studies | 22% ± 6% | |
mesothelial cell | 5 studies | 35% ± 9% | |
endothelial cell of sinusoid | 4 studies | 51% ± 22% | |
glomerular endothelial cell | 4 studies | 57% ± 4% | |
glial cell | 4 studies | 30% ± 13% | |
microglial cell | 4 studies | 44% ± 26% | |
interneuron | 4 studies | 46% ± 13% | |
abnormal cell | 3 studies | 30% ± 11% | |
neural crest cell | 3 studies | 23% ± 4% | |
GABAergic interneuron | 3 studies | 29% ± 7% | |
amacrine cell | 3 studies | 39% ± 27% | |
adipocyte | 3 studies | 20% ± 4% | |
lymphocyte | 3 studies | 44% ± 31% | |
GABAergic amacrine cell | 3 studies | 21% ± 5% | |
retina horizontal cell | 3 studies | 19% ± 2% | |
hepatocyte | 3 studies | 50% ± 21% | |
adventitial cell | 3 studies | 25% ± 4% | |
chondrocyte | 3 studies | 37% ± 16% | |
mucus secreting cell | 3 studies | 25% ± 6% | |
goblet cell | 3 studies | 47% ± 31% | |
astrocyte | 3 studies | 27% ± 14% | |
renal principal cell | 3 studies | 23% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4690.34 | 1445 / 1445 | 100% | 27.06 | 183 / 183 |
ovary | 100% | 13620.07 | 180 / 180 | 99% | 31.43 | 427 / 430 |
skin | 100% | 6769.77 | 1807 / 1809 | 97% | 52.18 | 460 / 472 |
thymus | 100% | 8290.89 | 653 / 653 | 97% | 22.39 | 584 / 605 |
breast | 100% | 6334.07 | 459 / 459 | 97% | 22.10 | 1079 / 1118 |
kidney | 100% | 5689.75 | 89 / 89 | 96% | 43.72 | 869 / 901 |
lung | 100% | 8610.21 | 578 / 578 | 95% | 18.32 | 1097 / 1155 |
uterus | 100% | 5164.10 | 170 / 170 | 95% | 18.35 | 434 / 459 |
pancreas | 98% | 2546.59 | 322 / 328 | 96% | 18.39 | 171 / 178 |
prostate | 100% | 5148.70 | 245 / 245 | 93% | 13.78 | 469 / 502 |
stomach | 100% | 3327.01 | 359 / 359 | 91% | 14.15 | 261 / 286 |
intestine | 100% | 4683.53 | 965 / 966 | 90% | 12.97 | 472 / 527 |
bladder | 100% | 5013.76 | 21 / 21 | 88% | 12.89 | 444 / 504 |
adrenal gland | 100% | 5101.44 | 258 / 258 | 78% | 10.92 | 179 / 230 |
brain | 80% | 2365.57 | 2120 / 2642 | 79% | 9.31 | 557 / 705 |
liver | 98% | 2257.99 | 222 / 226 | 47% | 5.68 | 189 / 406 |
adipose | 100% | 6114.08 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 4841.90 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 100% | 8848.44 | 860 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6802.17 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 94% | 1779.02 | 752 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 14.87 | 39 / 45 |
eye | 0% | 0 | 0 / 0 | 65% | 8.77 | 52 / 80 |
peripheral blood | 18% | 711.79 | 169 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.99 | 3 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007155 | Biological process | cell adhesion |
GO_0007528 | Biological process | neuromuscular junction development |
GO_0048786 | Cellular component | presynaptic active zone |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0045296 | Molecular function | cadherin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PPFIBP1 |
Protein name | PPFIBP1 protein PPFIA binding protein 1 Liprin-beta-1 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein-binding protein 1) (PTPRF-interacting protein-binding protein 1) (hSGT2) |
Synonyms | KIAA1230 |
Description | FUNCTION: May regulate the disassembly of focal adhesions. Did not bind receptor-like tyrosine phosphatases type 2A. . |
Accessions | ENST00000545334.5 ENST00000537261.1 H0YGH8 A0A087WVX8 ENST00000538433.5 F5H495 ENST00000535047.5 [Q86W92-5] ENST00000542187.1 A0A0A0MTP2 ENST00000535575.1 Q86W92 ENST00000542629.5 [Q86W92-4] ENST00000539326.1 ENST00000619325.1 F5H6Q7 ENST00000540114.5 F5H7K5 ENST00000545381.5 H0YFE4 F5H0E0 ENST00000318304.12 [Q86W92-1] ENST00000537927.5 [Q86W92-3] F5GZP6 ENST00000228425.11 [Q86W92-2] Q05CN4 |