Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 7 studies | 19% ± 3% | |
CD8-positive, alpha-beta T cell | 6 studies | 22% ± 9% | |
epithelial cell | 5 studies | 30% ± 10% | |
ciliated cell | 5 studies | 24% ± 4% | |
effector CD8-positive, alpha-beta T cell | 4 studies | 18% ± 2% | |
exhausted T cell | 3 studies | 22% ± 5% | |
non-classical monocyte | 3 studies | 25% ± 6% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 17% ± 2% | |
endothelial cell | 3 studies | 22% ± 5% | |
regulatory T cell | 3 studies | 16% ± 0% | |
macrophage | 3 studies | 21% ± 4% | |
dendritic cell | 3 studies | 29% ± 5% | |
plasmacytoid dendritic cell | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1293.13 | 459 / 459 | 100% | 30.79 | 1118 / 1118 |
esophagus | 100% | 1352.31 | 1445 / 1445 | 100% | 27.36 | 183 / 183 |
intestine | 100% | 1321.32 | 966 / 966 | 100% | 28.22 | 527 / 527 |
kidney | 100% | 1392.89 | 89 / 89 | 100% | 23.49 | 901 / 901 |
liver | 100% | 1032.43 | 226 / 226 | 100% | 20.79 | 406 / 406 |
ovary | 100% | 930.69 | 180 / 180 | 100% | 40.45 | 430 / 430 |
prostate | 100% | 1264.37 | 245 / 245 | 100% | 22.70 | 502 / 502 |
skin | 100% | 1517.59 | 1809 / 1809 | 100% | 24.60 | 472 / 472 |
stomach | 100% | 1087.83 | 359 / 359 | 100% | 27.86 | 286 / 286 |
uterus | 100% | 1076.54 | 170 / 170 | 100% | 31.22 | 459 / 459 |
brain | 100% | 1215.40 | 2641 / 2642 | 100% | 21.61 | 705 / 705 |
thymus | 100% | 1335.13 | 653 / 653 | 100% | 24.18 | 604 / 605 |
lung | 100% | 1115.15 | 577 / 578 | 100% | 27.99 | 1155 / 1155 |
pancreas | 100% | 709.49 | 327 / 328 | 100% | 22.68 | 178 / 178 |
bladder | 100% | 1266.67 | 21 / 21 | 100% | 31.20 | 502 / 504 |
adrenal gland | 100% | 1594.95 | 258 / 258 | 99% | 20.88 | 228 / 230 |
adipose | 100% | 1293.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 20.63 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 40.18 | 29 / 29 |
spleen | 100% | 1616.29 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.38 | 1 / 1 |
blood vessel | 100% | 1241.08 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1108.90 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1000.38 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1099.50 | 902 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001682 | Biological process | tRNA 5'-leader removal |
GO_0006364 | Biological process | rRNA processing |
GO_0030681 | Cellular component | multimeric ribonuclease P complex |
GO_0000172 | Cellular component | ribonuclease MRP complex |
GO_0030677 | Cellular component | ribonuclease P complex |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0033204 | Molecular function | ribonuclease P RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0004526 | Molecular function | ribonuclease P activity |
Gene name | POP4 |
Protein name | Ribonuclease P protein subunit p29 POP4 homolog, ribonuclease P/MRP subunit Ribonuclease P protein subunit p29 (hPOP4) |
Synonyms | RPP29 |
Description | FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. . FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. . FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. . |
Accessions | K7ESH8 K7EQV2 ENST00000585603.6 K7ERD7 ENST00000221770.7 O95707 ENST00000586420.5 K7EK50 ENST00000586823.5 ENST00000591061.5 ENST00000590688.1 A0A0A0MQS4 |